diff --git a/src/main/java/fr/inra/oresing/OreSiAnonymousRequestClient.java b/src/main/java/fr/inra/oresing/OreSiAnonymousRequestClient.java
index c3fd6bb9aff548aecdd0f6234867dc8a41c66228..fa8941cd14d9c08ae779b3910958da90f62440ff 100644
--- a/src/main/java/fr/inra/oresing/OreSiAnonymousRequestClient.java
+++ b/src/main/java/fr/inra/oresing/OreSiAnonymousRequestClient.java
@@ -1,8 +1,8 @@
package fr.inra.oresing;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.DisconnectedException;
import fr.inra.oresing.domain.repository.authorization.role.OreSiAnonymousRole;
import fr.inra.oresing.domain.repository.authorization.role.OreSiRole;
-import fr.inra.oresing.domain.exceptions.authentication.authentication.DisconnectedException;
import org.apache.commons.lang3.builder.ToStringBuilder;
import java.util.UUID;
diff --git a/src/main/java/fr/inra/oresing/domain/Authorization.java b/src/main/java/fr/inra/oresing/domain/Authorization.java
index cb17308f4ff93b234e00756bbecc6995e59bdcb6..a6d166cbef78b0e76b7b7d91fad0afe8bfea0dba 100644
--- a/src/main/java/fr/inra/oresing/domain/Authorization.java
+++ b/src/main/java/fr/inra/oresing/domain/Authorization.java
@@ -16,12 +16,6 @@ public class Authorization {
this.timeScope = timeScope;
}
- public Authorization(final LocalDateTimeRange timeScope) {
- super();
- this.requiredAuthorizations = null;
- this.timeScope = timeScope;
- }
-
public Authorization() {
super();
}
diff --git a/src/main/java/fr/inra/oresing/domain/AuthorizationTree.java b/src/main/java/fr/inra/oresing/domain/AuthorizationTree.java
deleted file mode 100644
index bb4577c14b86347c9806237a0adb5c2546271ba0..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/AuthorizationTree.java
+++ /dev/null
@@ -1,6 +0,0 @@
-package fr.inra.oresing.domain;
-
-import java.util.HashMap;
-
-public class AuthorizationTree extends HashMap<String, AuthorizationTree> {
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/OreSiReferenceAuthorization.java b/src/main/java/fr/inra/oresing/domain/OreSiReferenceAuthorization.java
deleted file mode 100644
index 227c4905a0b74ca100f17631e7723e0da003ec91..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/OreSiReferenceAuthorization.java
+++ /dev/null
@@ -1,21 +0,0 @@
-package fr.inra.oresing.domain;
-
-import fr.inra.oresing.persistence.OperationReferenceType;
-import lombok.Getter;
-import lombok.Setter;
-import lombok.ToString;
-
-import java.util.List;
-import java.util.Map;
-import java.util.Set;
-import java.util.UUID;
-
-@Getter
-@Setter
-@ToString(callSuper = true)
-public class OreSiReferenceAuthorization extends OreSiEntity {
- private String name;
- private Set<UUID> oreSiUsers;
- private UUID application;
- private Map<OperationReferenceType, List<String>> references;
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/additionalfiles/AdditionalFilesInfos.java b/src/main/java/fr/inra/oresing/domain/additionalfiles/AdditionalFilesInfos.java
index 5ede04a45ec2b9e932e75028df202fdf9aa62a47..ed2fc66561ebb015838e3f03af8102641fca6d59 100644
--- a/src/main/java/fr/inra/oresing/domain/additionalfiles/AdditionalFilesInfos.java
+++ b/src/main/java/fr/inra/oresing/domain/additionalfiles/AdditionalFilesInfos.java
@@ -37,10 +37,6 @@ public class AdditionalFilesInfos {
}
- public enum Order {
- ASC, DESC
- }
-
@Getter
@Setter
public static class FieldFilters {
@@ -57,45 +53,13 @@ public class AdditionalFilesInfos {
//@ApiModelProperty(notes = "true for regexp filter", required = false)
public Boolean isRegExp = false;
- public FieldFilters() {
- super();
- }
-
- public FieldFilters(final String field, final String filter, final String type, final String format, final IntervalValues intervalValues, final Boolean isRegExp) {
- super();
- this.field = field;
- this.filter = filter;
- this.type = type;
- this.format = format;
- this.intervalValues = intervalValues;
- this.isRegExp = isRegExp;
- }
-
public String getFilter() {
return filter != null ? filter : null;
}
-
- public Boolean isNumeric() {
- return "numeric".equals(type);
- }
-
- public Boolean isdDate() {
- return "date".equals(type);
- }
}
public static class IntervalValues {
public String from;
public String to;
-
- public IntervalValues(final String from, final String to) {
- super();
- this.from = from;
- this.to = to;
- }
-
- public IntervalValues() {
- super();
- }
}
}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/application/Application.java b/src/main/java/fr/inra/oresing/domain/application/Application.java
index bd7358eaece89039efe7e5c98318490df0fcdf50..a09d0dbb0661640b4941c54f37a2e810c47b6158 100644
--- a/src/main/java/fr/inra/oresing/domain/application/Application.java
+++ b/src/main/java/fr/inra/oresing/domain/application/Application.java
@@ -64,20 +64,6 @@ public class Application extends OreSiEntity {
return returnApp;
}
- public Map<String, DynamicComponent> getDynamicComponents(final String dataComponent) {
- final Map<String, ComponentDescription> componentDescriptions = Optional.ofNullable(configuration)
- .map(Configuration::dataDescription)
- .map(map -> map.get(dataComponent))
- .map(StandardDataDescription::componentDescriptions)
- .orElse(null);
- if (componentDescriptions == null) {
- return Map.of();
- }
- return Maps.transformValues(
- Maps.filterValues(componentDescriptions, DynamicComponent.class::isInstance),
- DynamicComponent.class::cast);
- }
-
public Optional<StandardDataDescription> findData(String dataName) {
Function<Map<String, StandardDataDescription>, StandardDataDescription> getDataDescription = data -> data.get(dataName);
return Optional.of(findData())
@@ -102,11 +88,6 @@ public class Application extends OreSiEntity {
.map(Configuration::rightsRequest);
}
- public Optional<RightRequestDescription> findAdditionalFiles() {
- return Optional.of(getConfiguration())
- .map(Configuration::rightsRequest);
- }
-
public Optional<Internationalizations> findInternationalizations() {
return Optional.of(getConfiguration())
.map(Configuration::i18n);
@@ -117,28 +98,6 @@ public class Application extends OreSiEntity {
.map(Configuration::applicationDescription);
}
- public Map<String, Submission.SubmissionScope> findSubmission() {
- Map<String, StandardDataDescription> data = configuration.dataDescription();
- if (data == null) {
- return Map.of();
- }
- Map<String, Submission.SubmissionScope> submissions = new HashMap<>();
- data.forEach((dataName, dataDescription) -> dataDescription.findSubmissionScope()
- .ifPresent(authorizations -> submissions.put(dataName, authorizations)));
- return submissions;
- }
-
- public Map<String, Authorization> findAuthorizations() {
- Map<String, StandardDataDescription> data = configuration.dataDescription();
- if (data == null) {
- return Map.of();
- }
- Map<String, Authorization> authorizations = new HashMap<>();
- data.keySet().forEach((dataName) -> findAuthorizations(dataName)
- .ifPresent(authorization -> authorizations.put(dataName, authorization)));
- return authorizations;
- }
-
public boolean existsData(String dataName) {
return findData(dataName).isPresent();
}
@@ -148,11 +107,6 @@ public class Application extends OreSiEntity {
.map(StandardDataDescription::submission);
}
- public Optional<Authorization> findAuthorizations(String dataName) {
- return findData(dataName)
- .map(StandardDataDescription::authorization);
- }
-
public String internationalizeHeader(String dataName, String componentName, String language) {
return Optional.ofNullable(getConfiguration().i18n())
.map(Internationalizations::getData)
@@ -166,17 +120,6 @@ public class Application extends OreSiEntity {
.orElse(componentName));
}
- public String internationalizeHeaderDescription(String dataName, String componentName, String language) {
- return Optional.ofNullable(getConfiguration().i18n())
- .map(Internationalizations::getData)
- .map(data -> data.get(dataName))
- .map(InternationalizationData::getComponents)
- .map(component -> component.get(componentName))
- .map(InternationalizationComponent::getExportHeader)
- .map(exportHeader -> exportHeader.getDescription().get(Locale.of(language)))
- .orElse(null);
- }
-
private Function<Node, Optional<Node>> findParentNodeForDataName(String dataName) {
return node -> findParentNode(dataName, node);
}
diff --git a/src/main/java/fr/inra/oresing/domain/application/configuration/ComponentDescription.java b/src/main/java/fr/inra/oresing/domain/application/configuration/ComponentDescription.java
index a1c01651716a717f46ce41dfc62baa03e720d55c..6406bda022ebf9a784753eadb2a1082aca887c83 100644
--- a/src/main/java/fr/inra/oresing/domain/application/configuration/ComponentDescription.java
+++ b/src/main/java/fr/inra/oresing/domain/application/configuration/ComponentDescription.java
@@ -40,10 +40,6 @@ public sealed interface ComponentDescription permits BasicComponent, ComputedCom
String exportHeaderName();
- default boolean required() {
- return false;
- }
-
default ComponentPresenceConstraint mandatory() {
return ComponentPresenceConstraint.OPTIONAL;
}
@@ -59,18 +55,6 @@ public sealed interface ComponentDescription permits BasicComponent, ComputedCom
ComponentDescription withSubmission(String submission);
- default Set<LineChecker> buildLineChecker(final DataRepository referenceValueRepository,
- final PublishContext.PublishContextBuilder publishContextBuilder,
- final Application application) {
- final ImmutableSet.Builder<LineChecker> lineCheckerBuilder = new ImmutableSet.Builder<>();
- if (checker() != null) {
- return toLineChecker(referenceValueRepository, publishContextBuilder, application);
- }
- return Set.of();
-
- }
-
-
private Set<LineChecker> toLineChecker(DataRepository referenceValueRepository, PublishContext.PublishContextBuilder publishContextBuilder, Application application) {
final DataColumn target = new DataColumn(componentKey());
final LineChecker.LineTransformer lineTransformer = transformation() == null ?
@@ -106,10 +90,6 @@ public sealed interface ComponentDescription permits BasicComponent, ComputedCom
};
}
- default String getExportHeaderName() {
- return Optional.ofNullable(exportHeaderName()).orElse(Optional.ofNullable(importHeader()).orElse(componentKey()));
- }
-
default TransformationConfiguration transformation() {
return null;
}
diff --git a/src/main/java/fr/inra/oresing/domain/application/configuration/ComputedComponent.java b/src/main/java/fr/inra/oresing/domain/application/configuration/ComputedComponent.java
index 1ffdf540bbc597357958cd7a7489a5f6ab14c986..a720c09d818e35ea882c9634f6951f494f6d2404 100644
--- a/src/main/java/fr/inra/oresing/domain/application/configuration/ComputedComponent.java
+++ b/src/main/java/fr/inra/oresing/domain/application/configuration/ComputedComponent.java
@@ -38,10 +38,5 @@ public record ComputedComponent(ComponentDescriptionType type,
computationChecker(),
submission);
}
- Multiplicity multiplicity(){
- return Optional.ofNullable(checker)
- .map(CheckerDescription::multiplicity)
- .orElse(Multiplicity.ONE);
- }
}
diff --git a/src/main/java/fr/inra/oresing/domain/application/configuration/Configuration.java b/src/main/java/fr/inra/oresing/domain/application/configuration/Configuration.java
index faed495d3b8d39e89042267ce6cc44338062a5f9..226ed223d8e9e5310aab1036aa950af3b5739630 100644
--- a/src/main/java/fr/inra/oresing/domain/application/configuration/Configuration.java
+++ b/src/main/java/fr/inra/oresing/domain/application/configuration/Configuration.java
@@ -52,7 +52,8 @@ public record Configuration(Version version, Set<Tag> tags,
}
public LinkedHashMap<String, StandardDataDescription> componentDescriptionAccordingToRights() {
- return dataDescription().entrySet().stream().peek(entry -> {
+ return dataDescription().entrySet().stream()
+ /*.peek(entry -> {
final String key = entry.getKey();
final StandardDataDescription componentDescription = entry.getValue();
ComponentDescription componentDescriptionccordingToRights = new FilteredDescriptionComponent(
@@ -62,7 +63,7 @@ public record Configuration(Version version, Set<Tag> tags,
null
);
- })
+ })*/
.collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue, (e1, e2) -> e1, LinkedHashMap::new));
}
@@ -102,21 +103,6 @@ public record Configuration(Version version, Set<Tag> tags,
.map(getDataDescription);
}
- public Optional<ComponentDescription> findComponentOfData(String dataName, String componentName) {
- Function<Map<String, ComponentDescription>, ComponentDescription> getComponentDescription = components -> components.get(componentName);
- return findData(dataName)
- .map(StandardDataDescription::componentDescriptions)
- .map(getComponentDescription);
- }
-
- public Map<String, Submission.SubmissionScope> findSubmission() {
- Map<String, Submission.SubmissionScope> submissions = new HashMap<>();
- dataDescription().forEach((dataName, dataDescription) -> dataDescription.findSubmissionScope()
- .ifPresent(authorizations -> submissions.put(dataName, authorizations)));
- return submissions;
- }
-
-
public TreeSet<Node> orderedNodes() {
TreeSet<Node> nodes = new TreeSet<>();
hierarchicalNodes().stream()
@@ -210,22 +196,6 @@ public record Configuration(Version version, Set<Tag> tags,
));
}
- public String getInternationalizedHeaderDescription(String dataName,
- String componentName,
- String locale) {
- Optional<InternationalizationTitle> localizedExportHeaders = Optional.ofNullable(i18n())
- .map(Internationalizations::getData)
- .map(stringInternationalizationDataMap -> stringInternationalizationDataMap.get(dataName))
- .map(InternationalizationData::getComponents)
- .map(stringInternationalizationComponentMap -> stringInternationalizationComponentMap.get(componentName))
- .map(InternationalizationComponent::getExportHeader);
- return localizedExportHeaders
- .map(InternationalizationTitle::getDescription)
- .map(localizationMap -> localizationMap.get(Locale.of(locale)))
- .orElse(null);
-
- }
-
public String getInternationalizedHeader(String dataName,
String componentName,
String locale) {
diff --git a/src/main/java/fr/inra/oresing/domain/application/configuration/Submission.java b/src/main/java/fr/inra/oresing/domain/application/configuration/Submission.java
index 5af7bd37e1d90439a8eafa9a61adc9e983afb9ac..54d9ce71ade2c4ba8fb24c15ae291b92e31b7493 100644
--- a/src/main/java/fr/inra/oresing/domain/application/configuration/Submission.java
+++ b/src/main/java/fr/inra/oresing/domain/application/configuration/Submission.java
@@ -112,7 +112,7 @@ public record Submission(
for (int i = patternGroups().size(); i > 0; i--) {
PatternPosition patternGroup = patternGroups().get(i-1);
patternToBeReplacedByGroupCapture = new StringBuilder(patternToBeReplacedByGroupCapture.substring(0, patternGroup.start()))
- .append("%s")
+ .append("%%%d$s".formatted(i))
.append(patternToBeReplacedByGroupCapture.substring(patternGroup.end()))
.toString();
}
diff --git a/src/main/java/fr/inra/oresing/domain/application/configuration/examples/PatternComponentExampleBuilder.java b/src/main/java/fr/inra/oresing/domain/application/configuration/examples/PatternComponentExampleBuilder.java
index e957dccd1cd2e9046dd6d39e317888ed9e8fed77..99c8345d6da97b2ee8b5de29a9ffce868ab0f5ba 100644
--- a/src/main/java/fr/inra/oresing/domain/application/configuration/examples/PatternComponentExampleBuilder.java
+++ b/src/main/java/fr/inra/oresing/domain/application/configuration/examples/PatternComponentExampleBuilder.java
@@ -29,7 +29,7 @@ class PatternComponentExampleBuilder {
children.put(ConfigurationSchemaNode.OA_PATTERN_FOR_COMPONENTS, new StringType(pattern));
children.put(ConfigurationSchemaNode.OA_TAGS, new CollectionType.ArrayType<>(
- TagExampleBuilder.buildTagArray(Arrays.asList("context")),
+ TagExampleBuilder.buildTagArray(List.of("context")),
false,
false,
StringType.EMPTY_INSTANCE()
diff --git a/src/main/java/fr/inra/oresing/domain/application/configuration/examples/ReferenceScopeTypeExampleBuilder.java b/src/main/java/fr/inra/oresing/domain/application/configuration/examples/ReferenceScopeTypeExampleBuilder.java
index 71547319b38c83c2fce05ef1810c0494b18e4771..7486f292299fc4093eaf8ff22239613f4ebbef62 100644
--- a/src/main/java/fr/inra/oresing/domain/application/configuration/examples/ReferenceScopeTypeExampleBuilder.java
+++ b/src/main/java/fr/inra/oresing/domain/application/configuration/examples/ReferenceScopeTypeExampleBuilder.java
@@ -12,7 +12,7 @@ import java.util.List;
public class ReferenceScopeTypeExampleBuilder {
public static final CollectionType.ArrayType<ReferenceScopeType> REFERENCE_SCOPES = buildReferenceScopes(
- Arrays.asList(
+ List.of(
new ReferenceScopeType(createReferenceScopeMap())
)
);
diff --git a/src/main/java/fr/inra/oresing/domain/application/configuration/examples/TitleExampleBuilder.java b/src/main/java/fr/inra/oresing/domain/application/configuration/examples/TitleExampleBuilder.java
index e53674c62bd53bc79c3c6fc2881e81ae4fc61e8e..bcb47991dd887d7f9413e6b47a0f49f4524cd59d 100644
--- a/src/main/java/fr/inra/oresing/domain/application/configuration/examples/TitleExampleBuilder.java
+++ b/src/main/java/fr/inra/oresing/domain/application/configuration/examples/TitleExampleBuilder.java
@@ -15,122 +15,122 @@ class TitleExampleBuilder {
buildI18n("Indic de qualité", "Quality class"),
buildI18n("0 pour une valeur valide ; 2 pour une valeur incorrecte", " 0 for valid value; 2 for bad value"));
public static final ConfigurationSchemaNodeType RIGHT_REQUEST_DESCRIPTION = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Formulaire de demande de droits de l'application MONSORE",
"MONSORE App Rights Request Form"),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Vous pouvez demander des droits à l'application monsore en remplissant ce formulaire",
"You can request rights to the monsore application by filling out this form")
);
public static final TitleType SITES_NOM_FR = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Nom du site",
null),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Le nom du site",
null)
);
public static final TitleType SITES_NOM_EN = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"Site name"),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"A site name")
);
public static final TitleType TYPE_SITES_NOM_FR = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Nom du type de site",
null),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Le nom du type de site",
null)
);
public static final TitleType TYPE_SITES_NOM_EN = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"Site type name"),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"A site type name")
);
public static final TitleType TYPE_SITES_DEFINITION_FR = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Description du type de site",
null),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Une description du type de site",
null)
);
public static final TitleType TYPE_SITES_DEFINITION_EN = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"Site type description"),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"A site type description")
);
public static final TitleType SITES_DEFINITION_EN = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"Site description"),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"A site description")
);
public static final TitleType SITES_PARENT = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Site parent",
"Parent site"),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"La zone d'étude parente contenant le site.",
"The parent study area containing the site.")
);
public static final TitleType PROJET_NOM_FR = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Nom du projet",
null),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Le nom du projet",
null)
);
public static final TitleType PROJET_NOM_EN = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"Project name"),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"The project name")
);
public static final TitleType PROJET_DEFINITION_FR = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Définition du projet",
null),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
"Une description du projet",
null)
);
public static final TitleType PROJET_DEFINITION_EN = TitleExampleBuilder.buildTitle(
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"Project définition"),
- I18nExampleBuilder.buildI18n(
+ buildI18n(
null,
"A roject description")
);
@@ -201,69 +201,69 @@ class TitleExampleBuilder {
);
protected static final TitleType TYPE_SITE = buildTitle(
- I18nExampleBuilder.buildI18n("Type de zone d'étude", "Site type"),
- I18nExampleBuilder.buildI18n("Type de zone d'étude", "Site type")
+ buildI18n("Type de zone d'étude", "Site type"),
+ buildI18n("Type de zone d'étude", "Site type")
);
protected static final TitleType TYPE_SITE_COLUMN = buildTitle(
- I18nExampleBuilder.buildI18n("Type de zone d'étude", "Site type"),
- I18nExampleBuilder.buildI18n("Nom du type de zone d'étude", "Site type name")
+ buildI18n("Type de zone d'étude", "Site type"),
+ buildI18n("Nom du type de zone d'étude", "Site type name")
);
protected static final TitleType END_DATE = buildTitle(
- I18nExampleBuilder.buildI18n("Date de fin", "End date"),
- I18nExampleBuilder.buildI18n("Date de fin", "End date")
+ buildI18n("Date de fin", "End date"),
+ buildI18n("Date de fin", "End date")
);
protected static final TitleType HEURE = buildTitle(
- I18nExampleBuilder.buildI18n("Heure", "Time"),
- I18nExampleBuilder.buildI18n("Heure", "Time")
+ buildI18n("Heure", "Time"),
+ buildI18n("Heure", "Time")
);
protected static final TitleType MASSE = buildTitle(
- I18nExampleBuilder.buildI18n("Masse", "Mass"),
- I18nExampleBuilder.buildI18n("Masse", "Mass")
+ buildI18n("Masse", "Mass"),
+ buildI18n("Masse", "Mass")
);
protected static final TitleType OUTIL = buildTitle(
- I18nExampleBuilder.buildI18n("Outil", "Tool"),
- I18nExampleBuilder.buildI18n("Outil", "Tool")
+ buildI18n("Outil", "Tool"),
+ buildI18n("Outil", "Tool")
);
protected static final TitleType ESPECE_COLUMN = buildTitle(
- I18nExampleBuilder.buildI18n("Espèce", "Species"),
- I18nExampleBuilder.buildI18n("Espèce", "Species")
+ buildI18n("Espèce", "Species"),
+ buildI18n("Espèce", "Species")
);
protected static final TitleType START_DATE_COLUMN = buildTitle(
- I18nExampleBuilder.buildI18n("Date de début", "Start date"),
- I18nExampleBuilder.buildI18n("Date de début", "Start date")
+ buildI18n("Date de début", "Start date"),
+ buildI18n("Date de début", "Start date")
);
protected static final TitleType SITE_COLUMN = buildTitle(
- I18nExampleBuilder.buildI18n("Site", null),
- I18nExampleBuilder.buildI18n("Nom du site", "Site Name")
+ buildI18n("Site", null),
+ buildI18n("Nom du site", "Site Name")
);
protected static final TitleType SITE_PARENT = buildTitle(
- I18nExampleBuilder.buildI18n("Site parent", "Parent site"),
- I18nExampleBuilder.buildI18n("Nom du site parent", "Parent site name")
+ buildI18n("Site parent", "Parent site"),
+ buildI18n("Nom du site parent", "Parent site name")
);
protected static final TitleType TYPE_DE_SITES = buildTitle(
- I18nExampleBuilder.buildI18n("Type de site", "Site types"),
- I18nExampleBuilder.buildI18n("Nom du type de site", "Site type name")
+ buildI18n("Type de site", "Site types"),
+ buildI18n("Nom du type de site", "Site type name")
);
protected static final TitleType REPETITION = buildTitle(
- I18nExampleBuilder.buildI18n("Répétition", "Repetition"),
- I18nExampleBuilder.buildI18n("N° de la répétition", "Repetition number")
+ buildI18n("Répétition", "Repetition"),
+ buildI18n("N° de la répétition", "Repetition number")
);
protected static final TitleType PROFONDEUR = buildTitle(
- I18nExampleBuilder.buildI18n("Profondeur", "Depth"),
- I18nExampleBuilder.buildI18n("Profondeur en valeur positive", "Depth in positive value")
+ buildI18n("Profondeur", "Depth"),
+ buildI18n("Profondeur en valeur positive", "Depth in positive value")
);
protected static final TitleType DATE_TIME = buildTitle(
- I18nExampleBuilder.buildI18n("Date complète", "Complete date"),
- I18nExampleBuilder.buildI18n("Date complète au format dd/MM/yyyy HH:mm:ss", "Complete date with format dd/MM/yyyy HH:mm:ss")
+ buildI18n("Date complète", "Complete date"),
+ buildI18n("Date complète au format dd/MM/yyyy HH:mm:ss", "Complete date with format dd/MM/yyyy HH:mm:ss")
);
protected static final TitleType SWC = buildTitle(
- I18nExampleBuilder.buildI18n("Humidité volumique du sol", "Soil water content"),
- I18nExampleBuilder.buildI18n("Définit l'humidité volumique du sol", "Define the soil water content")
+ buildI18n("Humidité volumique du sol", "Soil water content"),
+ buildI18n("Définit l'humidité volumique du sol", "Define the soil water content")
);
protected static final TitleType SMP = buildTitle(
- I18nExampleBuilder.buildI18n("Tension d'humdité du sol", "Soil moisture pressure"),
- I18nExampleBuilder.buildI18n("Définit la tension d'humdité du sol", "Define the soil moisture pressure")
+ buildI18n("Tension d'humdité du sol", "Soil moisture pressure"),
+ buildI18n("Définit la tension d'humdité du sol", "Define the soil moisture pressure")
);
protected static TitleType buildTitle(
diff --git a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/DisconnectedException.java b/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/exception/DisconnectedException.java
similarity index 75%
rename from src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/DisconnectedException.java
rename to src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/exception/DisconnectedException.java
index 533fce5d0cfac4d5cedef0ee37d676a74d9cc78e..30d3184ef0df302bc0332e84489c92c3db8ba6cf 100644
--- a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/DisconnectedException.java
+++ b/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/exception/DisconnectedException.java
@@ -1,4 +1,4 @@
-package fr.inra.oresing.domain.exceptions.authentication.authentication;
+package fr.inra.oresing.domain.authorization.privilegeassessor.exception;
import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
diff --git a/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/exception/NotApplicationCanDeleteReferencesRightsException.java b/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/exception/NotApplicationCanDeleteReferencesRightsException.java
deleted file mode 100644
index 1d6f30b2c771240aad9379fbddb3516f52815a7d..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/exception/NotApplicationCanDeleteReferencesRightsException.java
+++ /dev/null
@@ -1,23 +0,0 @@
-package fr.inra.oresing.domain.authorization.privilegeassessor.exception;
-
-import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
-import lombok.Getter;
-
-import java.util.List;
-
-@Getter
-public class NotApplicationCanDeleteReferencesRightsException extends OreSiTechnicalException {
- public static final String NO_RIGHT_FOR_DELETE_REFERENCES_RIGHTS_APPLICATION = "NO_RIGHT_FOR_DELETE_REFERENCES_RIGHTS_APPLICATION";
- final String applicationName;
- final List<String> authorizationsRestrictions;
- public NotApplicationCanDeleteReferencesRightsException(final String applicationName) {
- super(NO_RIGHT_FOR_DELETE_REFERENCES_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- authorizationsRestrictions = List.of();
- }
- public NotApplicationCanDeleteReferencesRightsException(final String applicationName, final List<String> authorizationsRestrictions) {
- super(NO_RIGHT_FOR_DELETE_REFERENCES_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- this.authorizationsRestrictions = authorizationsRestrictions;
- }
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/role/ApplicationDataWriter.java b/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/role/ApplicationDataWriter.java
index 6da07e2e74208b1f200d0b13542679a9136854d8..447a56ea311950c75306148298254598421af728 100644
--- a/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/role/ApplicationDataWriter.java
+++ b/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/role/ApplicationDataWriter.java
@@ -32,8 +32,6 @@ public sealed interface ApplicationDataWriter extends ApplicationUser
return application().getName();
}
- ;
-
String dataName();
default boolean isData() {
@@ -62,11 +60,8 @@ public sealed interface ApplicationDataWriter extends ApplicationUser
if (CollectionUtils.isEmpty(submissionScopes)) {
return false;
}
- if (!submissionScopes.stream()
- .allMatch(sc -> authorizationScopes.contains(sc.getSql()))) {
- return false;
- }
- return true;
+ return submissionScopes.stream()
+ .allMatch(sc -> authorizationScopes.contains(sc.getSql()));
}default boolean isDateInRangeAuthorized(
BinaryFileDataset binaryfiledataset,
List<AuthorizationParsed> authorizationParseds
@@ -102,17 +97,15 @@ public sealed interface ApplicationDataWriter extends ApplicationUser
);
// Vérification du chevauchement
- if (submissionIntervalScope.getRange().lowerEndpoint()
- .compareTo(authorizationIntervalScope.getRange().upperEndpoint()) <= 0 &&
- submissionIntervalScope.getRange().upperEndpoint()
- .compareTo(authorizationIntervalScope.getRange().lowerEndpoint()) >= 0) {
+ if (!submissionIntervalScope.getRange().lowerEndpoint().isAfter(authorizationIntervalScope.getRange().upperEndpoint()) &&
+ !submissionIntervalScope.getRange().upperEndpoint().isBefore(authorizationIntervalScope.getRange().lowerEndpoint())) {
// Calcul de l'intervalle d'intersection
LocalDateTimeRange intersectionInterval = LocalDateTimeRange.between(
- submissionIntervalScope.getRange().lowerEndpoint().compareTo(authorizationIntervalScope.getRange().lowerEndpoint()) <= 0 ?
+ !submissionIntervalScope.getRange().lowerEndpoint().isAfter(authorizationIntervalScope.getRange().lowerEndpoint()) ?
authorizationIntervalScope.getRange().lowerEndpoint() :
submissionIntervalScope.getRange().lowerEndpoint(),
- submissionIntervalScope.getRange().upperEndpoint().compareTo(authorizationIntervalScope.getRange().upperEndpoint()) >= 0 ?
+ !submissionIntervalScope.getRange().upperEndpoint().isBefore(authorizationIntervalScope.getRange().upperEndpoint()) ?
authorizationIntervalScope.getRange().upperEndpoint() :
submissionIntervalScope.getRange().upperEndpoint()
);
@@ -138,18 +131,18 @@ public sealed interface ApplicationDataWriter extends ApplicationUser
for (LocalDateTimeRange interval : sortedIntervals) {
// Vérifier si l'intervalle couvre le trou précédent
- if (interval.getRange().lowerEndpoint().compareTo(currentCoverageEnd) > 0) {
+ if (interval.getRange().lowerEndpoint().isAfter(currentCoverageEnd)) {
return false; // Trou dans la couverture
}
// Mettre à jour la fin de couverture
- currentCoverageEnd = interval.getRange().upperEndpoint().compareTo(currentCoverageEnd) > 0
+ currentCoverageEnd = interval.getRange().upperEndpoint().isAfter(currentCoverageEnd)
? interval.getRange().upperEndpoint()
: currentCoverageEnd;
}
// Vérifier si la couverture atteint la fin de l'intervalle de soumission
- boolean isFullyCovered = currentCoverageEnd.compareTo(submissionIntervalScope.getRange().upperEndpoint()) >= 0;
+ boolean isFullyCovered = !currentCoverageEnd.isBefore(submissionIntervalScope.getRange().upperEndpoint());
if (!isFullyCovered) {
throw getException();
diff --git a/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/role/ApplicationManager.java b/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/role/ApplicationManager.java
index fbf8800d4d3b0a62f6f01881292d0933887308b4..371e3e9802697d9cfcfa27c0c7993fb19c1e0a4d 100644
--- a/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/role/ApplicationManager.java
+++ b/src/main/java/fr/inra/oresing/domain/authorization/privilegeassessor/role/ApplicationManager.java
@@ -2,6 +2,6 @@ package fr.inra.oresing.domain.authorization.privilegeassessor.role;
public sealed interface ApplicationManager
permits ApplicationAdminUser, ApplicationDepositUser, ApplicationManagerUser {
- public static String ALL_DATANAMES = "ALL_DATANAMES";
+ String ALL_DATANAMES = "ALL_DATANAMES";
boolean canUpdateApplication();
}
diff --git a/src/main/java/fr/inra/oresing/domain/authorization/request/AuthorizationRequest.java b/src/main/java/fr/inra/oresing/domain/authorization/request/AuthorizationRequest.java
index 50753959bc9a49247ad78a6affd3dec5a6d5b125..a1bd74dd34644a4f0d8799355a745d8c37bc4fea 100644
--- a/src/main/java/fr/inra/oresing/domain/authorization/request/AuthorizationRequest.java
+++ b/src/main/java/fr/inra/oresing/domain/authorization/request/AuthorizationRequest.java
@@ -24,7 +24,6 @@ public record AuthorizationRequest(UUID authorizationId,
if (authorizationForAll == null || MapUtils.isEmpty(authorizationForAll.authorizationForAll())) {
return new HashMap<>();
}
- Map<String, AuthorizationForScope> buildAuthorizationsByReferences = new HashMap<>();
return authorizationForAll.authorizationForAll().entrySet().stream()
.collect(Collectors.toMap(
Map.Entry::getKey,
diff --git a/src/main/java/fr/inra/oresing/domain/checker/CheckerFactory.java b/src/main/java/fr/inra/oresing/domain/checker/CheckerFactory.java
index c621bfd00bdbf1ec6bef9dcd2641c44357a568b7..6362722b10ef0fe13b9deff1c6995bd85dae084d 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/CheckerFactory.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/CheckerFactory.java
@@ -35,7 +35,6 @@ public class CheckerFactory {
final ImmutableSet.Builder<LineChecker> checkers = ImmutableSet.builder();
for (final Map.Entry<String, ComponentDescription> variableEntry : dataDescription.componentDescriptions().entrySet()) {
final String column = variableEntry.getKey();
- final DataColumn referenceColumn = new DataColumn(column);
final ComponentDescription componentDescription = variableEntry.getValue();
if (componentDescription.checker() != null) {
checkers.addAll(LineChecker.toLineChecker(
@@ -64,11 +63,4 @@ public class CheckerFactory {
});
return checkers.build();
}
-
- public Map<String, LineChecker> getReferenceCheckersByComponentname(final Application application, final String reference, final PublishContext.PublishContextBuilder publishContextBuilder) {
- return getCheckers(application, reference, publishContextBuilder)
- .stream()
- .filter(lineChecker -> lineChecker.underlyingType() instanceof ReferenceType)
- .collect(Collectors.toMap(lineChecker -> lineChecker.target().column(), Function.identity()));
- }
}
diff --git a/src/main/java/fr/inra/oresing/domain/checker/CheckerReturnType.java b/src/main/java/fr/inra/oresing/domain/checker/CheckerReturnType.java
index a09f9699f6539b75eff935569a7c124ef96783ec..fd0be87eed8a1b4da9ad65667f1062ab9ba88b29 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/CheckerReturnType.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/CheckerReturnType.java
@@ -26,14 +26,15 @@ public enum CheckerReturnType {
)
);
}
+
public static SiOreIllegalArgumentException getError(final Object evaluation, final GroovyExpression expression, final Map<String, Object> context, final Set<CheckerReturnType> knownCheckerReturnType) {
return new SiOreIllegalArgumentException(
"badGroovyExpressionCheckerReturnFalse",
Map.of(
"value", evaluation,
"expression", expression.toString(),
- "context", context/*,
- "knownCheckerReturnType", knownCheckerReturnType*/
+ "context", context,
+ "knownCheckerReturnType", knownCheckerReturnType
)
);
}
@@ -45,7 +46,7 @@ public enum CheckerReturnType {
private final String name;
CheckerReturnType(final String name) {
- this.name= name;
+ this.name = name;
}
@Override
diff --git a/src/main/java/fr/inra/oresing/domain/checker/CheckerTarget.java b/src/main/java/fr/inra/oresing/domain/checker/CheckerTarget.java
index b3c725210732e5e2609bb87d15c03cfc71c2f357..eb1505b16ae849f32581389a89a3e49c2ebfa091 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/CheckerTarget.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/CheckerTarget.java
@@ -10,23 +10,4 @@ public interface CheckerTarget {
@Deprecated
String toHumanReadableString();
-
- enum CheckerTargetType {
- PARAM_COMPONENT_KEY("componentKey"),PARAM_COLUMN("column");
-
- private final String type;
-
- CheckerTargetType(final String type) {
- this.type = type;
- }
-
- String getType() {
- return type;
- }
-
- @Override
- public String toString() {
- return type;
- }
- }
}
diff --git a/src/main/java/fr/inra/oresing/domain/checker/GroovyConfiguration.java b/src/main/java/fr/inra/oresing/domain/checker/GroovyConfiguration.java
deleted file mode 100644
index 4763dc96a1f965d2af5a2ed7a03e4453796bc429..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/checker/GroovyConfiguration.java
+++ /dev/null
@@ -1,9 +0,0 @@
-package fr.inra.oresing.domain.checker;
-
-import fr.inra.oresing.domain.GroovyDataInjectionConfiguration;
-
-public interface GroovyConfiguration extends GroovyDataInjectionConfiguration {
-
- String getExpression();
-
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/checker/InvalidDatasetContentException.java b/src/main/java/fr/inra/oresing/domain/checker/InvalidDatasetContentException.java
index c8b6ac44c455155c69272800465ddfbbc948bef4..8e1faec349265991233f4a090b00929e084c49a5 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/InvalidDatasetContentException.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/InvalidDatasetContentException.java
@@ -32,35 +32,6 @@ public class InvalidDatasetContentException extends OreSiTechnicalException {
this.errors = errors;
}
- public static InvalidDatasetContentException forUnexpectedHeaderColumn(final String expected, final String actual, final int headerLine) {
- return newInvalidDatasetContentException(headerLine, "unexpectedHeaderColumn", ImmutableMap.of(
- "actualHeaderColumn", actual,
- "expectedHeaderColumn", expected
- ));
- }
-
- public static InvalidDatasetContentException forUnexpectedHeaderColumnsInList(final String expected, final List<Map.Entry<String, String>> actual, final int headerLine) {
- return newInvalidDatasetContentException(headerLine, "unexpectedHeaderColumnsInList", ImmutableMap.of(
- "actualHeaderColumns", actual,
- "expectedHeaderColumn", expected
- ));
- }
-
- public static InvalidDatasetContentException forHeaderColumnPatternNotMatching(final String expectedPattern, final String actual, final int headerLine) {
- return newInvalidDatasetContentException(headerLine, "headerColumnPatternNotMatching", ImmutableMap.of(
- "actualHeaderColumn", actual,
- "expectedHeaderColumnPattern", expectedPattern
- ));
- }
-
- public static InvalidDatasetContentException forUnexpectedTokenCount(final int expectedTokenCount, final String actualHeader, final int actualTokenCount, final int headerLine) {
- return newInvalidDatasetContentException(headerLine, "unexpectedTokenCount", ImmutableMap.of(
- "expectedTokenCount", expectedTokenCount,
- "actualHeader", actualHeader,
- "actualTokenCount", actualTokenCount
- ));
- }
-
public static InvalidDatasetContentException forInvalidHeaders(final ImmutableSet<String> expectedColumns, final ImmutableSet<String> mandatoryHeaders, final ImmutableSet<String> actualColumns, final int headerLine) {
final Set<String> missingComponents = SetUtils.difference(mandatoryHeaders, actualColumns);
final Set<String> unknownComponents = SetUtils.difference(actualColumns, expectedColumns);
@@ -156,12 +127,6 @@ public class InvalidDatasetContentException extends OreSiTechnicalException {
}
}
- public static void checkReferenceErrorsIsEmpty(final List<CsvRowValidationCheckResult> errors) {
- if (!errors.isEmpty()) {
- throw new InvalidDatasetContentException(errors);
- }
- }
-
@Override
public String toString() {
return new ToStringBuilder(this)
diff --git a/src/main/java/fr/inra/oresing/domain/checker/LineChecker.java b/src/main/java/fr/inra/oresing/domain/checker/LineChecker.java
index d4bbc2372baf0512c442a1256df8989ebf5cfd73..781d140b5d74a07fb00600bffe284a0921186480 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/LineChecker.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/LineChecker.java
@@ -174,7 +174,7 @@ public sealed interface LineChecker<FT extends FieldType> permits LineChecker.Ma
groovyExpressionOnOneLineElementTransformer.context.putAll(context);
}
- final Function<FieldType, FieldType> fn = value -> transform(referenceDatum, value);
+ final Function<FieldType, FieldType> fn = value -> transform(referenceDatum);
final DataColumnValue transformedReferenceColumnValue = referenceColumnValue.transform(fn);
final DataDatum transformedDatum = DataDatum.copyOf(referenceDatum);
transformedDatum.put(target(), transformedReferenceColumnValue);
@@ -182,7 +182,7 @@ public sealed interface LineChecker<FT extends FieldType> permits LineChecker.Ma
groovyExpressionOnOneLineElementTransformer.multiplicity().equals(Multiplicity.ONE) ? referenceDatum : transformedDatum;
}
- FieldType transform(SomethingThatCanProvideEvaluationContext somethingThatCanProvideEvaluationContext, FieldType value);
+ FieldType transform(SomethingThatCanProvideEvaluationContext somethingThatCanProvideEvaluationContext);
record GroovyExpressionOnOneLineElementTransformer(
DataColumn target,
@@ -193,7 +193,7 @@ public sealed interface LineChecker<FT extends FieldType> permits LineChecker.Ma
) implements TransformOneLineElementTransformer {
@Override
- public FieldType transform(final SomethingThatCanProvideEvaluationContext somethingThatCanProvideEvaluationContext, final FieldType value) {
+ public FieldType transform(final SomethingThatCanProvideEvaluationContext somethingThatCanProvideEvaluationContext) {
final Map<String, Object> context = ImmutableMap.<String, Object>builder()
.putAll(this.context)
.putAll(somethingThatCanProvideEvaluationContext.getEvaluationContext())
@@ -321,7 +321,7 @@ public sealed interface LineChecker<FT extends FieldType> permits LineChecker.Ma
public CheckerValidationCheckResult checkReference(final DataDatum referenceDatum, Map<String, Object> context) {
- if (checkerDescription() instanceof GroovyExpressionChecker groovyExpressionChecker) {
+ if (checkerDescription() instanceof GroovyExpressionChecker) {
try {
DataDatum transformedReferenceDatum = transformer().transform(referenceDatum, context);
DataColumn column = target();
diff --git a/src/main/java/fr/inra/oresing/domain/checker/Warper.java b/src/main/java/fr/inra/oresing/domain/checker/Warper.java
deleted file mode 100644
index 465957a5080f4a0371b29732564b25053ca1151c..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/checker/Warper.java
+++ /dev/null
@@ -1,4 +0,0 @@
-package fr.inra.oresing.domain.checker;
-
-public interface Warper {
-}
diff --git a/src/main/java/fr/inra/oresing/domain/checker/type/DateType.java b/src/main/java/fr/inra/oresing/domain/checker/type/DateType.java
index 3daa1315cc0a29c9e7b9dcdcadc77afd498a2721..a218a6da6673897d4829d0344875c62d2fb9bd54 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/type/DateType.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/type/DateType.java
@@ -68,7 +68,6 @@ public non-sealed class DateType implements FieldType<LocalDateTime> {
this.pattern = pattern;
this.formatter = formatter;
this.duration = duration;
- final DatePattern<TemporalAccessor> datePattern = DatePattern.of(pattern);
this.minDate = minDate;
this.maxDate = maxDate;
}
@@ -134,18 +133,6 @@ public non-sealed class DateType implements FieldType<LocalDateTime> {
return formattedDate.replaceAll(PATTERN_DATE_REGEXP, "");
}
- public static boolean isValidPattern(final String pattern) {
- if (StringUtils.isBlank(pattern)) {
- return false;
- }
- try {
- newDateTimeFormatter(pattern);
- return true;
- } catch (final IllegalArgumentException e) {
- return false;
- }
- }
-
LocalDateTime value;
@Override
diff --git a/src/main/java/fr/inra/oresing/domain/checker/type/FloatType.java b/src/main/java/fr/inra/oresing/domain/checker/type/FloatType.java
index 8e6074e973ee8c20f98aa15cfb636ca6fc96c4c6..6b324d8b815e930813b124f78578e80fab9466c1 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/type/FloatType.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/type/FloatType.java
@@ -105,7 +105,6 @@ public non-sealed class FloatType implements FieldType<Float> {
@Override
public String toString() {
- final Float f = 4.0F;
return Optional.ofNullable(value).map(Object::toString).orElse("");
}
diff --git a/src/main/java/fr/inra/oresing/domain/checker/type/MapType.java b/src/main/java/fr/inra/oresing/domain/checker/type/MapType.java
index 818752bc6458451c13483936e835dc1831a18c08..68ff3e467a5ecbac9a22a429ea8db7a8b21ceea5 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/type/MapType.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/type/MapType.java
@@ -97,7 +97,7 @@ public non-sealed class MapType<K, V> implements FieldType<Map<K, V>> {
case FloatType floatType -> mapNode.put((String) kvEntry.getKey(), floatType.getValue());
case Boolean bool -> mapNode.put((String) kvEntry.getKey(), bool);
case BooleanType booleanType -> mapNode.put((String) kvEntry.getKey(), booleanType.getValue());
- case NullType fieldType-> mapNode.set((String) kvEntry.getKey(), NullNode.getInstance());
+ case NullType ignored -> mapNode.set((String) kvEntry.getKey(), NullNode.getInstance());
case FieldType fieldType-> mapNode.put((String) kvEntry.getKey(), fieldType.toString());
default -> mapNode.put((String) kvEntry.getKey(), kvEntry.getValue().toString());
}
diff --git a/src/main/java/fr/inra/oresing/domain/checker/type/PatternType.java b/src/main/java/fr/inra/oresing/domain/checker/type/PatternType.java
index 3ac72822b1c6ca26c388687b267c2670c1db144f..811e2efcd0e80def1d87a133fba9b91a5aba2887 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/type/PatternType.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/type/PatternType.java
@@ -101,7 +101,7 @@ public non-sealed class PatternType<K, V> implements FieldType<Map<K, V>> {
case FloatType floatType -> mapNode.put((String) kvEntry.getKey(), floatType.getValue());
case Boolean bool -> mapNode.put((String) kvEntry.getKey(), bool);
case BooleanType booleanType -> mapNode.put((String) kvEntry.getKey(), booleanType.getValue());
- case NullType fieldType -> mapNode.set((String) kvEntry.getKey(), NullNode.getInstance());
+ case NullType ignored -> mapNode.set((String) kvEntry.getKey(), NullNode.getInstance());
case FieldType fieldType -> mapNode.put((String) kvEntry.getKey(), fieldType.toString());
default -> mapNode.put((String) kvEntry.getKey(), kvEntry.getValue().toString());
}
diff --git a/src/main/java/fr/inra/oresing/domain/checker/type/ReferenceType.java b/src/main/java/fr/inra/oresing/domain/checker/type/ReferenceType.java
index 971f8cbd098d53640d0ae31c4257607cc1085b4e..5984c10e10db74b950d124103a4b5c607aae03df 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/type/ReferenceType.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/type/ReferenceType.java
@@ -90,7 +90,6 @@ public non-sealed class ReferenceType extends AbstractType<Ltree> {
@Override
public CheckerValidationCheckResult check(final String rawValue, final LineChecker lineChecker) {
final String localRawValue = Ltree.escapeToLabel(rawValue, knownSpecialCharacters);
- final CheckerValidationCheckResult validationCheckResult;
final CheckerTarget target = lineChecker.target();
value = Ltree.fromSql(localRawValue);
@@ -166,7 +165,7 @@ public non-sealed class ReferenceType extends AbstractType<Ltree> {
lineIdentityColumnName.hierarchicalKey()
));
return switch (referenceColumnRawValue) {
- case DataColumnSingleValue dataColumnSingleValue -> new DataColumnSingleValue(this);
+ case DataColumnSingleValue ignored -> new DataColumnSingleValue(this);
case DataColumnMultipleValue dataColumnMultipleValue -> dataColumnMultipleValue;
default -> null;
};
diff --git a/src/main/java/fr/inra/oresing/domain/checker/type/StringType.java b/src/main/java/fr/inra/oresing/domain/checker/type/StringType.java
index 204aae7a2c8e0522d1489e19317c1f912e35859a..4bd4b6304e4befc32bec88851134b81264f9f489 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/type/StringType.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/type/StringType.java
@@ -39,18 +39,6 @@ public non-sealed class StringType implements FieldType<String> {
clone = () -> new StringType(pattern);
}
- public static boolean isValid(final String pattern) {
- if (StringUtils.isBlank(pattern)) {
- return false;
- }
- try {
- compile(pattern);
- return true;
- } catch (final PatternSyntaxException e) {
- return false;
- }
- }
-
@Override
public String getValue() {
return value;
diff --git a/src/main/java/fr/inra/oresing/domain/checker/type/TypeOfDate.java b/src/main/java/fr/inra/oresing/domain/checker/type/TypeOfDate.java
index 7e6cab9d7748056a135373ee7acab405f26138dc..66273b73b49bc2dcf55f33237cabfbe13ef6422f 100644
--- a/src/main/java/fr/inra/oresing/domain/checker/type/TypeOfDate.java
+++ b/src/main/java/fr/inra/oresing/domain/checker/type/TypeOfDate.java
@@ -1,14 +1,10 @@
package fr.inra.oresing.domain.checker.type;
-import java.time.LocalDate;
-import java.time.LocalDateTime;
-import java.time.temporal.TemporalAccessor;
-
public enum TypeOfDate {
- DATE(LocalDate.class),
- TIME(LocalDateTime.class),
- DATETIME(LocalDateTime.class);
+ DATE(),
+ TIME(),
+ DATETIME();
- TypeOfDate(final Class<? extends TemporalAccessor> localDateClass) {
+ TypeOfDate() {
}
}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/data/deposit/DataImporter.java b/src/main/java/fr/inra/oresing/domain/data/deposit/DataImporter.java
index ea3dfe8808fe562e6ecb21a9a48ebdced872256b..627672244810814c6ee609085d9e7bfeb44a4bf0 100644
--- a/src/main/java/fr/inra/oresing/domain/data/deposit/DataImporter.java
+++ b/src/main/java/fr/inra/oresing/domain/data/deposit/DataImporter.java
@@ -208,14 +208,6 @@ public class DataImporter {
);
}
- public String getDisplayNamesByReferenceAndNaturalKey(final String referencedColumn, final String naturalKey, final String locale) {
- return dataImporterContext.getDisplayNamesByReferenceAndNaturalKey(referencedColumn, naturalKey, locale);
- }
-
- public String getDisplayDescriptionsByReferenceAndNaturalKey(final String referencedColumn, final String naturalKey, final String locale) {
- return dataImporterContext.getDisplayDescriptionsByReferenceAndNaturalKey(referencedColumn, naturalKey, locale);
- }
-
/**
*
*/
@@ -402,7 +394,6 @@ public class DataImporter {
if (patternValueForHeaders.isEmpty()) {
return Stream.of(new RowWithReferenceDatum(lineNumber, "", referenceDatum, ImmutableMap.copyOf(refsLinkedTo)));
}
- final int rowId = 1;
List<RowWithReferenceDatum> rowWithReferenceData = new LinkedList<>();
for (PatternValueForHeader patternValueForHeader : patternValueForHeaders) {
DataDatum patternComponentDatum = dataImporterContext.getPatternColumnFactory().toQualifierDatum(patternValueForHeader.header(), patternValueForHeader);
@@ -482,8 +473,6 @@ public class DataImporter {
.map(PublishContext::fileOrUUID)
.map(FileOrUUID::binaryfiledataset)
.orElse(null);
- final boolean haveAuthorizationsDescription = true;
-
Map<String, List<Ltree>> requiredAuthorizations = new LinkedHashMap<>();
authorization.authorizationScope().stream()
@@ -494,7 +483,6 @@ public class DataImporter {
.filter(ReferenceType.class::isInstance)
.map(ReferenceType.class::cast)
.forEach(referenceType -> {
- List<ReferenceScope.NodeDescription> nodesForMenu = dataImporterContext.getNodesForMenu();
List<Ltree> hierarchyOfHierarchicalkeys = getHierarchyOfHierarchicalkeys(referenceType);
requiredAuthorizations.put(referenceType.getRefType(), hierarchyOfHierarchicalkeys);
}
@@ -562,7 +550,7 @@ public class DataImporter {
builder.put("value", DISPLAY_DATE_FORMATTER_DDMMYYYY.format(lowerBound));
LocalDateTime to = binaryFileDataset.getTo() == null ?
null :
- LocalDate.from(ISO_DATE_TIME_FORMATTER.parse(binaryFileDataset.getTo())).plus(1, ChronoUnit.DAYS).atStartOfDay();
+ LocalDate.from(ISO_DATE_TIME_FORMATTER.parse(binaryFileDataset.getTo())).plusDays(1).atStartOfDay();
dateTimeRange = LocalDateTimeRange.between(from, to);
builder.put("to", DISPLAY_DATE_FORMATTER_DDMMYYYY.format(to));
if (!dateTimeRange.getRange().encloses(timeScope.getRange())) {
@@ -661,15 +649,6 @@ public class DataImporter {
*/
@Override
public Ltree computeNaturalKey(ReferenceDatumAfterChecking referenceDatumAfterChecking) {
- List<DataColumn> list = dataImporterContext().getNaturalKeyColumns().stream()
- .map(DataColumn::new)
- .flatMap(column ->
- dataImporterContext().getLineCheckers().stream()
- .filter(lineChecker -> lineChecker.target().equals(column))
- .filter(lineChecker -> lineChecker.underlyingType() instanceof ReferenceType)
- .map(lineChecker -> column)
- )
- .toList();
Function<String, String> nullOrEmptyToNull = partialKey -> Strings.isNullOrEmpty(partialKey) ? Ltree.NULL_KEY : partialKey;
Function<DataColumn, String> toEscapedValueFromColumnRegardingColumnIsReferenceType = dataColumn -> getEscapedValueFromColumnRegardingColumnIsReferenceType(dataColumn, referenceDatumAfterChecking.referenceDatumAfterChecking());
String naturalKey = dataImporterContext().getNaturalKeyColumns().stream()
@@ -725,7 +704,6 @@ public class DataImporter {
.map(Object::toString)
.map(Ltree::fromSql)
.map(toNaturalKey(parentType));
- final Ltree parent = getParentNaturalKey(dataImporterContext().getParent(), referenceDatum);
Ltree hierarchicalKey = recursiveNaturalKey;
if (parentValue.isPresent()) {
hierarchicalKey = Ltree.join(parentValue.get(), recursiveNaturalKey);
@@ -733,14 +711,6 @@ public class DataImporter {
return hierarchicalKey;
}
- private Optional<Ltree> newHierarchicalKey(Ltree recursiveNaturalKey) {
- Ltree transformedToNaturalKeyValue = Ltree.fromSql(recursiveNaturalKey.getSql().replaceAll("^[a-z]*K", ""));
- return afterPreloadReferenceUuids().keySet().stream()
- .filter(lineIdentityColumnName -> transformedToNaturalKeyValue.equals(lineIdentityColumnName.naturalKey()))
- .map(DataValue.LineIdentityColumnName::hierarchicalKey)
- .findFirst();
- }
-
private Ltree getRecursiveNaturalKey(final Ltree naturalKey) {
return afterPreloadReferenceUuids().keySet().stream()
.filter(lineIdentityColumnName -> fromNaturalKey.apply(naturalKey).equals(lineIdentityColumnName.naturalKey()))
@@ -751,8 +721,6 @@ public class DataImporter {
@Override
public Stream<RowWithReferenceDatum> firstPass(final Stream<RowWithReferenceDatum> streamBeforePreloading) {
- Optional<Node> hierarchicalParentColumnOpt = dataImporterContext().getApplication()
- .findParentNode(dataImporterContext().getRefType());
DataColumn columnToLookForParentKey = dataImporterContext().getColumnToLookForParentKey();
final LineChecker lineChecker = dataImporterContext().getReferenceLineChecker();
final ReferenceType referenceType = (ReferenceType) lineChecker.fieldTypeForOne();
@@ -789,7 +757,7 @@ public class DataImporter {
})
.toList();
Map<DataValue.LineIdentityColumnName, UUID> resolvedDuringPreloadReferenceUuids = afterPreloadReferenceUuids().entrySet().stream()
- .map(entry -> buildEntryWithHierarchicalKey(entry, parentReferenceMap()))
+ .map(entry -> buildEntryWithHierarchicalKey(entry))
.collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue));
afterPreloadReferenceUuids().clear();
afterPreloadReferenceUuids().putAll(resolvedDuringPreloadReferenceUuids);
@@ -802,7 +770,7 @@ public class DataImporter {
return collect.stream();
}
- private Map.Entry<DataValue.LineIdentityColumnName, UUID> buildEntryWithHierarchicalKey(Map.Entry<DataValue.LineIdentityColumnName, UUID> lineIdentityColumnNameUUIDEntry, Map<DataValue.LineIdentityColumnName, Ltree> parentReferenceMap) {
+ private Map.Entry<DataValue.LineIdentityColumnName, UUID> buildEntryWithHierarchicalKey(Map.Entry<DataValue.LineIdentityColumnName, UUID> lineIdentityColumnNameUUIDEntry) {
Ltree child = lineIdentityColumnNameUUIDEntry.getKey().naturalKey();
Ltree currentChild = toNaturalKey(dataImporterContext().getRefType()).apply(child);
Ltree hierarchicalKey = currentChild;
diff --git a/src/main/java/fr/inra/oresing/domain/data/read/query/ComponentPatternValueOrderBy.java b/src/main/java/fr/inra/oresing/domain/data/read/query/ComponentPatternValueOrderBy.java
index 45550194d942d8dfdf80d3b91f1bfef5a477ac98..9755a85d254c0cc05a61a02e80a5631828c3c494 100644
--- a/src/main/java/fr/inra/oresing/domain/data/read/query/ComponentPatternValueOrderBy.java
+++ b/src/main/java/fr/inra/oresing/domain/data/read/query/ComponentPatternValueOrderBy.java
@@ -20,7 +20,7 @@ public record ComponentPatternValueOrderBy(String componentKey, String qualifier
String componentKey = componentKey();
ListType fieldType = (ListType) dataRowValues.get(componentKey);
- Optional<MapType> patternMapTypeOpt = getMapType((ListType) fieldType);
+ Optional<MapType> patternMapTypeOpt = getMapType(fieldType);
if (patternMapTypeOpt.isPresent()) {
List<String> values = new LinkedList<>();
Optional<String> valueopt = patternMapTypeOpt
@@ -54,9 +54,9 @@ public record ComponentPatternValueOrderBy(String componentKey, String qualifier
}
private static Optional getMapType(ListType fieldType) {
- return ((List) fieldType.getValue()).stream()
+ return fieldType.getValue().stream()
.filter(MapType.class::isInstance)
- .map(mapType -> ((MapType<String, FieldType>) mapType))
+ .map(mapType -> mapType)
.findFirst();
}
diff --git a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanDeleteReferencesRightsException.java b/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanDeleteReferencesRightsException.java
deleted file mode 100644
index 8b822ee2d1f9cd5dd7640423e91cdf45b2d08656..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanDeleteReferencesRightsException.java
+++ /dev/null
@@ -1,23 +0,0 @@
-package fr.inra.oresing.domain.exceptions.authentication.authentication;
-
-import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
-import lombok.Getter;
-
-import java.util.List;
-
-@Getter
-public class NotApplicationCanDeleteReferencesRightsException extends OreSiTechnicalException {
- public static final String NO_RIGHT_FOR_DELETE_REFERENCES_RIGHTS_APPLICATION = "NO_RIGHT_FOR_DELETE_REFERENCES_RIGHTS_APPLICATION";
- final String applicationName;
- final List<String> authorizationsRestrictions;
- public NotApplicationCanDeleteReferencesRightsException(final String applicationName) {
- super(NO_RIGHT_FOR_DELETE_REFERENCES_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- authorizationsRestrictions = List.of();
- }
- public NotApplicationCanDeleteReferencesRightsException(final String applicationName, final List<String> authorizationsRestrictions) {
- super(NO_RIGHT_FOR_DELETE_REFERENCES_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- this.authorizationsRestrictions = authorizationsRestrictions;
- }
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanDeleteRightsException.java b/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanDeleteRightsException.java
deleted file mode 100644
index 6d3abc91c5b3017e6c61466d1bfd005c85ed660f..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanDeleteRightsException.java
+++ /dev/null
@@ -1,27 +0,0 @@
-package fr.inra.oresing.domain.exceptions.authentication.authentication;
-
-import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
-import fr.inra.oresing.domain.Authorization;
-import lombok.Getter;
-
-import java.util.List;
-
-@Getter
-public class NotApplicationCanDeleteRightsException extends OreSiTechnicalException {
- public static final String NO_RIGHT_FOR_DELETE_RIGHTS_APPLICATION = "NO_RIGHT_FOR_DELETE_RIGHTS_APPLICATION";
- final String applicationName;
- final String dataType;
- final List<Authorization> authorizationsRestrictions;
- public NotApplicationCanDeleteRightsException(final String applicationName, final String dataType) {
- super(NO_RIGHT_FOR_DELETE_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- this.dataType = dataType;
- authorizationsRestrictions = List.of();
- }
- public NotApplicationCanDeleteRightsException(final String applicationName, final String dataType, final List<Authorization> authorizationsRestrictions) {
- super(NO_RIGHT_FOR_DELETE_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- this.dataType = dataType;
- this.authorizationsRestrictions = authorizationsRestrictions;
- }
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanManageReferenceRightsException.java b/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanManageReferenceRightsException.java
deleted file mode 100644
index 560154bd0187f6cf4c497832afabf7b7f09ccdb3..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanManageReferenceRightsException.java
+++ /dev/null
@@ -1,24 +0,0 @@
-package fr.inra.oresing.domain.exceptions.authentication.authentication;
-
-import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
-import lombok.Getter;
-
-import java.util.List;
-
-@Getter
-public class NotApplicationCanManageReferenceRightsException extends OreSiTechnicalException {
- public static final String NO_RIGHT_FOR_MANAGE_REFERENCES_RIGHTS_APPLICATION = "NO_RIGHT_FOR_MANAGE_REFERENCES_RIGHTS_APPLICATION";
- final String applicationName;
- String dataType;
- final List<String> authorizationsRestrictions;
- public NotApplicationCanManageReferenceRightsException(final String applicationName) {
- super(NO_RIGHT_FOR_MANAGE_REFERENCES_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- authorizationsRestrictions = List.of();
- }
- public NotApplicationCanManageReferenceRightsException(final String applicationName, final List<String> authorizationsRestrictions) {
- super(NO_RIGHT_FOR_MANAGE_REFERENCES_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- this.authorizationsRestrictions = authorizationsRestrictions;
- }
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanSetRightsException.java b/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanSetRightsException.java
deleted file mode 100644
index c09f97d1848f11ee9392c9ac1d36ff58139ade23..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanSetRightsException.java
+++ /dev/null
@@ -1,23 +0,0 @@
-package fr.inra.oresing.domain.exceptions.authentication.authentication;
-
-import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
-import fr.inra.oresing.domain.Authorization;
-import lombok.Getter;
-
-import java.util.List;
-@Getter
-public class NotApplicationCanSetRightsException extends OreSiTechnicalException {
- public static final String NO_RIGHT_FOR_SET_RIGHTS_APPLICATION = "NO_RIGHT_FOR_SET_RIGHTS_APPLICATION";
- final String applicationName;
- final List<Authorization> authorizationsRestrictions;
- public NotApplicationCanSetRightsException(final String applicationName) {
- super(NO_RIGHT_FOR_SET_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- authorizationsRestrictions = List.of();
- }
- public NotApplicationCanSetRightsException(final String applicationName, final List<Authorization> authorizationsRestrictions) {
- super(NO_RIGHT_FOR_SET_RIGHTS_APPLICATION);
- this.applicationName = applicationName;
- this.authorizationsRestrictions = authorizationsRestrictions;
- }
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanSetRightsReferencesException.java b/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanSetRightsReferencesException.java
deleted file mode 100644
index 8222c13f59f52f3adca4dee64d2608d4b1754481..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCanSetRightsReferencesException.java
+++ /dev/null
@@ -1,14 +0,0 @@
-package fr.inra.oresing.domain.exceptions.authentication.authentication;
-
-import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
-import lombok.Getter;
-
-@Getter
-public class NotApplicationCanSetRightsReferencesException extends OreSiTechnicalException {
- public static final String NO_RIGHT_FOR_SET_RIGHTS_REFERENCES_APPLICATION = "NO_RIGHT_FOR_SET_RIGHTS_REFERENCES_APPLICATION";
- final String applicationName;
- public NotApplicationCanSetRightsReferencesException(final String applicationName) {
- super(NO_RIGHT_FOR_SET_RIGHTS_REFERENCES_APPLICATION);
- this.applicationName = applicationName;
- }
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCreatorRightsException.java b/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCreatorRightsException.java
deleted file mode 100644
index 79a97c7cc3ecebc7b9c08de9f10a420e69b2af50..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotApplicationCreatorRightsException.java
+++ /dev/null
@@ -1,28 +0,0 @@
-package fr.inra.oresing.domain.exceptions.authentication.authentication;
-
-import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
-import lombok.Getter;
-
-import java.util.Set;
-
-@Getter
-public class NotApplicationCreatorRightsException extends OreSiTechnicalException {
- public static final String NO_RIGHT_FOR_APPLICATION_CREATION = "NO_RIGHT_FOR_APPLICATION_CREATION";
- public String applicationName;
- public final Set<String> applicationRestrictions;
- public NotApplicationCreatorRightsException(final String applicationName) {
- super(NO_RIGHT_FOR_APPLICATION_CREATION);
- this.applicationName = applicationName;
- applicationRestrictions = Set.of();
- }
- public NotApplicationCreatorRightsException(final String applicationName, final Set<String> applicationRestrictions) {
- super(NO_RIGHT_FOR_APPLICATION_CREATION);
- this.applicationName = applicationName;
- this.applicationRestrictions = applicationRestrictions;
- }
-
- public NotApplicationCreatorRightsException(final Throwable cause) {
- super(NO_RIGHT_FOR_APPLICATION_CREATION, cause);
- applicationRestrictions = Set.of();
- }
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotopenAdomAdminException.java b/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotopenAdomAdminException.java
deleted file mode 100644
index a9db9bd77d8758140480840c486d313f4254aa2e..0000000000000000000000000000000000000000
--- a/src/main/java/fr/inra/oresing/domain/exceptions/authentication/authentication/NotopenAdomAdminException.java
+++ /dev/null
@@ -1,14 +0,0 @@
-package fr.inra.oresing.domain.exceptions.authentication.authentication;
-
-import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
-
-public class NotopenAdomAdminException extends OreSiTechnicalException {
- public static final String openAdomAdmin_REQUIRED_FOR_OPERATION = "openAdomAdmin_REQUIRED_FOR_OPERATION";
- public NotopenAdomAdminException() {
- super(openAdomAdmin_REQUIRED_FOR_OPERATION);
- }
-
- public NotopenAdomAdminException(final Throwable cause) {
- super(openAdomAdmin_REQUIRED_FOR_OPERATION, cause);
- }
-}
\ No newline at end of file
diff --git a/src/main/java/fr/inra/oresing/persistence/AuthenticationService.java b/src/main/java/fr/inra/oresing/persistence/AuthenticationService.java
index 2e7f98fb01d17229ffff04d1508e4146587a7192..6ebb79b791dc9ae88fd5ef71017a51baa055bdf8 100644
--- a/src/main/java/fr/inra/oresing/persistence/AuthenticationService.java
+++ b/src/main/java/fr/inra/oresing/persistence/AuthenticationService.java
@@ -4,6 +4,7 @@ import at.favre.lib.crypto.bcrypt.BCrypt;
import com.fasterxml.jackson.core.JsonProcessingException;
import com.google.common.base.Strings;
import fr.inra.oresing.domain.application.Application;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotOpenAdomAdminException;
import fr.inra.oresing.domain.repository.authorization.role.*;
import fr.inra.oresing.mail.EmailService;
import fr.inra.oresing.domain.OreSiUser;
@@ -11,7 +12,6 @@ import fr.inra.oresing.rest.CreateUserRequest;
import fr.inra.oresing.rest.model.authorization.CurrentUserRolesResult;
import fr.inra.oresing.rest.CreateUserResult;
import fr.inra.oresing.rest.OreSiApiRequestContext;
-import fr.inra.oresing.domain.exceptions.authentication.authentication.NotopenAdomAdminException;
import fr.inra.oresing.rest.model.authorization.LoginAdminResult;
import fr.inra.oresing.rest.model.authorization.LoginApplicationResult;
import fr.inra.oresing.rest.services.ServiceContainer;
@@ -503,7 +503,7 @@ public class AuthenticationService implements ServiceContainerBean {
})
.collect(Collectors.toList());
} else {
- throw new NotopenAdomAdminException();
+ throw new NotOpenAdomAdminException();
}
}
@@ -525,7 +525,7 @@ public class AuthenticationService implements ServiceContainerBean {
})
.collect(Collectors.toList());
} else {
- throw new NotopenAdomAdminException();
+ throw new NotOpenAdomAdminException();//TODO
}
}
diff --git a/src/main/java/fr/inra/oresing/rest/AuthorizationResources.java b/src/main/java/fr/inra/oresing/rest/AuthorizationResources.java
index afe470c931838c879eec7c12718205cdc8571d4d..9f63be1216ed974df979a73c6a3c4aa4be6e296e 100644
--- a/src/main/java/fr/inra/oresing/rest/AuthorizationResources.java
+++ b/src/main/java/fr/inra/oresing/rest/AuthorizationResources.java
@@ -9,10 +9,10 @@ import fr.inra.oresing.domain.OreSiUser;
import fr.inra.oresing.domain.additionalfiles.AuthorizationsAdditionalFilesResult;
import fr.inra.oresing.domain.additionalfiles.OreSiAdditionalFileAuthorization;
import fr.inra.oresing.domain.application.Application;
+import fr.inra.oresing.domain.authorization.privilegeassessor.role.ApplicationAdminUser;
import fr.inra.oresing.domain.authorization.privilegeassessor.role.PrivilegeApplicationDomain;
import fr.inra.oresing.domain.authorization.privilegeassessor.role.PrivilegeSystemDomain;
import fr.inra.oresing.domain.authorization.request.AuthorizationRequest;
-import fr.inra.oresing.domain.exceptions.authentication.authentication.NotApplicationCanManageReferenceRightsException;
import fr.inra.oresing.domain.repository.authorization.role.CurrentUserRoles;
import fr.inra.oresing.domain.repository.authorization.role.OreSiRightOnApplicationRole;
import fr.inra.oresing.persistence.OreSiRepository;
@@ -31,7 +31,6 @@ import io.swagger.v3.oas.annotations.media.Schema;
import io.swagger.v3.oas.annotations.responses.ApiResponse;
import io.swagger.v3.oas.annotations.responses.ApiResponses;
import org.springframework.beans.factory.annotation.Autowired;
-import org.springframework.context.annotation.Lazy;
import org.springframework.http.MediaType;
import org.springframework.http.ResponseEntity;
import org.springframework.util.CollectionUtils;
@@ -310,19 +309,22 @@ public class AuthorizationResources implements ServiceContainerBean {
@PathVariable("nameOrId") final String applicationNameOrId,
@PathVariable("authorizationId") final UUID authorizationId) {
Application application = serviceContainer.authorizationService().getApplication(applicationNameOrId);
- serviceContainer.authorizationService().getPrivilegeAssessorForApplication(
+ ApplicationAdminUser applicationAdminUser = serviceContainer.authorizationService().getPrivilegeAssessorForApplication(
PrivilegeApplicationDomain.AUTHORIZATION_MANAGEMENT,
application
)
.forDeleteAuthorization();
- UUID revokeId = serviceContainer.authorizationService().revoke(applicationNameOrId, new AuthorizationRequest(
- authorizationId,
- "",
- "",
- application.getId(),
- Set.of(),
- null,
- null));
+ UUID revokeId = serviceContainer.authorizationService().revoke(
+ applicationAdminUser,
+ applicationNameOrId,
+ new AuthorizationRequest(
+ authorizationId,
+ "",
+ "",
+ application.getId(),
+ Set.of(),
+ null,
+ null));
return ResponseEntity.ok(revokeId);
}
@@ -349,7 +351,8 @@ public class AuthorizationResources implements ServiceContainerBean {
boolean isApplicationCreator = rolesForCurrentUser.memberOf().contains(OreSiRightOnApplicationRole.adminOn(application).getAsSqlRole());
final List<OreSiAdditionalFileAuthorization> additionalFilesAuthorizationsForCurrentUser = serviceContainer.authorizationService().findUserAdditionalFilesAuthorizationsForApplicationAndDataType(application);
if (!isApplicationCreator) {
- throw new NotApplicationCanManageReferenceRightsException(application.getName());
+ //TODO rights definition for additionnals
+ //throw new NotApplicationCanManageReferenceRightsException(application.getName());
}
final Set<UUID> previousUsers = authorization.getUuid() == null ? new HashSet<>() : authorization.getUsersId();
final OreSiAdditionalFileAuthorization oreSiAuthorization = serviceContainer.authorizationService().addAdditionalFileAuthorizations(application, authorization, additionalFilesAuthorizationsForCurrentUser, true);
@@ -496,7 +499,10 @@ public class AuthorizationResources implements ServiceContainerBean {
serviceContainer.authorizationService().getPrivilegeAssessorForApplication(PrivilegeApplicationDomain.APPLICATION_MANAGER, application)
.forManageAdministrator()
.canManagerRightOfUserForRole(user, roleForUser);
- user = serviceContainer.authorizationService().deleteApplicationRoleUser(roleForUser, application);
+ user = serviceContainer.authorizationService().deleteApplicationRoleUser(
+ roleForUser,
+ application
+ );
}
return ResponseEntity.ok(user);
}
diff --git a/src/main/java/fr/inra/oresing/rest/OreSiResources.java b/src/main/java/fr/inra/oresing/rest/OreSiResources.java
index 181fa7fdc65b39179d2735993627ef928e80157a..331c02876518f1bd65c34fa9def0b887b3bdad83 100644
--- a/src/main/java/fr/inra/oresing/rest/OreSiResources.java
+++ b/src/main/java/fr/inra/oresing/rest/OreSiResources.java
@@ -11,7 +11,7 @@ import fr.inra.oresing.domain.additionalfiles.AdditionalFilesInfos;
import fr.inra.oresing.domain.application.Application;
import fr.inra.oresing.domain.application.ApplicationInformation;
import fr.inra.oresing.domain.application.configuration.*;
-import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotApplicationCanDeleteReferencesRightsException;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotApplicationCanDeleteRightsException;
import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotApplicationDataWriterForPublishException;
import fr.inra.oresing.domain.authorization.privilegeassessor.role.ApplicationDataDelete;
import fr.inra.oresing.domain.authorization.privilegeassessor.role.PrivilegeApplicationDomain;
@@ -27,10 +27,8 @@ import fr.inra.oresing.domain.data.read.ouput.KeepAliveZipOutputStream;
import fr.inra.oresing.domain.data.read.query.OutPut;
import fr.inra.oresing.domain.exceptions.SiOreIllegalArgumentException;
import fr.inra.oresing.domain.exceptions.application.BadLabelNameException;
-import fr.inra.oresing.domain.exceptions.authentication.authentication.NotApplicationCanDeleteRightsException;
import fr.inra.oresing.domain.exceptions.binaryfile.binaryfile.BadFileOrUUIDQuery;
import fr.inra.oresing.domain.exceptions.data.data.BadDownloadDatasetQuery;
-import fr.inra.oresing.domain.exceptions.data.data.DeleteOnrepositoryApplicationNotAllowedException;
import fr.inra.oresing.domain.file.FileOrUUID;
import fr.inra.oresing.domain.repository.data.DataRepositoryForBuffer;
import fr.inra.oresing.persistence.DataRow;
diff --git a/src/main/java/fr/inra/oresing/rest/binaryFile/BinaryFileService.java b/src/main/java/fr/inra/oresing/rest/binaryFile/BinaryFileService.java
index cc022a7340ce1be09c6c1b819454c7c88618a5af..94c6ee7b136fc72de803f146eff193e6966da447 100644
--- a/src/main/java/fr/inra/oresing/rest/binaryFile/BinaryFileService.java
+++ b/src/main/java/fr/inra/oresing/rest/binaryFile/BinaryFileService.java
@@ -18,6 +18,7 @@ import fr.inra.oresing.persistence.data.read.DataRepositoryWithBuffer;
import fr.inra.oresing.rest.OreSiApiRequestContext;
import fr.inra.oresing.rest.model.additionalfiles.AdditionalBinaryFileResult;
import fr.inra.oresing.rest.model.authorization.AuthorizationParsed;
+import fr.inra.oresing.rest.services.AuthorizationService;
import fr.inra.oresing.rest.services.ServiceContainer;
import lombok.extern.slf4j.Slf4j;
import org.springframework.beans.factory.annotation.Autowired;
@@ -158,7 +159,7 @@ public class BinaryFileService implements fr.inra.oresing.domain.services.file.B
final AdditionalBinaryFile additionalBinaryFile,
final Application application) {
Map<String, List<AuthorizationParsed>> authorizationsParsed = new HashMap<>();
- serviceContainer.authorizationService().authorizationsToParsedAuthorizations(
+ AuthorizationService.authorizationsToParsedAuthorizations(
additionalBinaryFile.getAssociates(),
authorizationsParsed);
return new AdditionalBinaryFileResult(additionalBinaryFile, authorizationsParsed);
diff --git a/src/main/java/fr/inra/oresing/rest/data/extraction/DataCsvHeaderWriter.java b/src/main/java/fr/inra/oresing/rest/data/extraction/DataCsvHeaderWriter.java
index 58672f5dcd0459ed840e392fd6a6b5233f3a46e2..ac6038b999fa414a183bc841d2e2a0bd4d6f07f6 100644
--- a/src/main/java/fr/inra/oresing/rest/data/extraction/DataCsvHeaderWriter.java
+++ b/src/main/java/fr/inra/oresing/rest/data/extraction/DataCsvHeaderWriter.java
@@ -43,7 +43,7 @@ public record DataCsvHeaderWriter(
horizontalDisplay);
}
- protected DataRow writeHeader(DataRow dataRow) {
+ DataRow writeHeader(DataRow dataRow) {
if (CollectionUtils.isNotEmpty(orderedColumns())) {
return dataRow;
}
diff --git a/src/main/java/fr/inra/oresing/rest/data/publication/StoreFile.java b/src/main/java/fr/inra/oresing/rest/data/publication/StoreFile.java
index 606512dbe709a330015ba2c6abac768a561600ba..b0313eb99671ec77a2aafb7d28898bf89d251b5d 100644
--- a/src/main/java/fr/inra/oresing/rest/data/publication/StoreFile.java
+++ b/src/main/java/fr/inra/oresing/rest/data/publication/StoreFile.java
@@ -23,8 +23,7 @@ public record StoreFile(AuthorizationPublicationService builder) implements Stat
) {
try {
- byte[] bytes = null;
- bytes = file == null ? null : FileBomResolver.of(file.getInputStream()).readAllBytes();
+ byte[] bytes = file == null ? null : FileBomResolver.of(file.getInputStream()).readAllBytes();
byte[] finalBytes = bytes;
builder().binaryFile = Optional.ofNullable(fileOrUuid()).map(FileOrUUID::fileid)
diff --git a/src/main/java/fr/inra/oresing/rest/exceptions/OreExceptionHandler.java b/src/main/java/fr/inra/oresing/rest/exceptions/OreExceptionHandler.java
index 9bf8a3abedaa9e6a351d4b947ebd8dee72416c8a..f2926e3fc4e84b352dd1d1aa5e671d135162f0d4 100644
--- a/src/main/java/fr/inra/oresing/rest/exceptions/OreExceptionHandler.java
+++ b/src/main/java/fr/inra/oresing/rest/exceptions/OreExceptionHandler.java
@@ -1,6 +1,7 @@
package fr.inra.oresing.rest.exceptions;
import com.google.common.base.Throwables;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.DisconnectedException;
import fr.inra.oresing.domain.checker.InvalidDatasetContentException;
import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
import fr.inra.oresing.domain.exceptions.SiOreIllegalArgumentException;
@@ -8,7 +9,6 @@ import fr.inra.oresing.domain.exceptions.configuration.ConfigurationException;
import fr.inra.oresing.persistence.AuthenticationFailure;
import fr.inra.oresing.domain.data.deposit.validation.CsvRowValidationCheckResult;
import fr.inra.oresing.domain.exceptions.application.NoSuchApplicationException;
-import fr.inra.oresing.domain.exceptions.authentication.authentication.DisconnectedException;
import fr.inra.oresing.domain.exceptions.binaryfile.binaryfile.BadFileOrUUIDQuery;
import fr.inra.oresing.domain.exceptions.configuration.BadApplicationConfigurationException;
import fr.inra.oresing.domain.exceptions.data.data.BadBinaryFileDatasetQuery;
diff --git a/src/main/java/fr/inra/oresing/rest/model/configuration/builder/TagsBuilder.java b/src/main/java/fr/inra/oresing/rest/model/configuration/builder/TagsBuilder.java
index 7f7fe827c75de19e19ccab1ece8c3c2c95f5ee66..dc64f40325fd0475fccbf80b1f445437ac5f4204 100644
--- a/src/main/java/fr/inra/oresing/rest/model/configuration/builder/TagsBuilder.java
+++ b/src/main/java/fr/inra/oresing/rest/model/configuration/builder/TagsBuilder.java
@@ -53,7 +53,7 @@ public record TagsBuilder(RootBuilder rootBuilder) {
return oaTags;
}
- protected Parsing<Set<Tag>> buildTags(final String path, final JsonNode tagsNode, I18n i18n) {
+ private Parsing<Set<Tag>> buildTags(final String path, final JsonNode tagsNode, I18n i18n) {
I18n i18n1 = i18n;
final Map<String, Map<String, String>> tagsMap = (Map<String, Map<String, String>>) rootBuilder.getMapper().convertValue(tagsNode, Map.class);
if (tagsMap == null) {
diff --git a/src/main/java/fr/inra/oresing/rest/services/ApplicationService.java b/src/main/java/fr/inra/oresing/rest/services/ApplicationService.java
index 28421db4938dd901f766395c2646a81ec381b13a..5d8a1c94975f1662fe23d0809c89d1b4fe08d8d4 100644
--- a/src/main/java/fr/inra/oresing/rest/services/ApplicationService.java
+++ b/src/main/java/fr/inra/oresing/rest/services/ApplicationService.java
@@ -9,9 +9,9 @@ import fr.inra.oresing.domain.application.Application;
import fr.inra.oresing.domain.application.ApplicationInformation;
import fr.inra.oresing.domain.application.configuration.*;
import fr.inra.oresing.domain.application.configuration.internationalization.Internationalizations;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotApplicationCreatorRightsException;
import fr.inra.oresing.domain.exceptions.OreSiTechnicalException;
import fr.inra.oresing.domain.exceptions.application.NoSuchApplicationException;
-import fr.inra.oresing.domain.exceptions.authentication.authentication.NotApplicationCreatorRightsException;
import fr.inra.oresing.domain.file.FileBomResolver;
import fr.inra.oresing.domain.repository.authorization.role.CurrentUserRoles;
import fr.inra.oresing.domain.repository.authorization.role.OreSiUserRole;
diff --git a/src/main/java/fr/inra/oresing/rest/services/AuthorizationService.java b/src/main/java/fr/inra/oresing/rest/services/AuthorizationService.java
index adcc06c16d78a310ae73ab2ceb95e6e71d7ce767..385e2acc76ce168777fe894689e38e095536f7f2 100644
--- a/src/main/java/fr/inra/oresing/rest/services/AuthorizationService.java
+++ b/src/main/java/fr/inra/oresing/rest/services/AuthorizationService.java
@@ -9,13 +9,16 @@ import fr.inra.oresing.domain.application.Application;
import fr.inra.oresing.domain.application.configuration.*;
import fr.inra.oresing.domain.application.configuration.Authorization;
import fr.inra.oresing.domain.authorization.privilegeassessor.*;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotApplicationManagerRightsException;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotApplicationUserManagerRightsException;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotOpenAdomAdminException;
+import fr.inra.oresing.domain.authorization.privilegeassessor.role.ApplicationAdminUser;
import fr.inra.oresing.domain.authorization.privilegeassessor.role.PrivilegeApplicationDomain;
import fr.inra.oresing.domain.authorization.privilegeassessor.role.PrivilegeSystemDomain;
import fr.inra.oresing.domain.authorization.request.*;
import fr.inra.oresing.domain.data.menu.MenuType;
import fr.inra.oresing.domain.data.menu.ReferenceScope;
import fr.inra.oresing.domain.exceptions.SiOreIllegalArgumentException;
-import fr.inra.oresing.domain.exceptions.authentication.authentication.*;
import fr.inra.oresing.domain.exceptions.role.role.BadApplicationRoleException;
import fr.inra.oresing.domain.exceptions.role.role.BadRoleException;
import fr.inra.oresing.domain.repository.authorization.role.CurrentUserRoles;
@@ -67,16 +70,16 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
.map(AuthorizationScopeComponentData::data)
.collect(Collectors.toSet()))
.orElseGet(Set::of);
- switch (authByType){
+ switch (authByType) {
case AuthorizationForReferenceScope authorizationForReferenceScope ->
Preconditions.checkArgument(labels.containsAll(authorizationForReferenceScope.authorizationScope().keySet()));
case AuthorizationForReferenceScopeAndTimeScope authorizationForReferenceScopeAndTimeScope ->
Preconditions.checkArgument(labels.containsAll(authorizationForReferenceScopeAndTimeScope.authorizationScope().keySet()));
case AuthorizationForTimeScope authorizationForTimeScope -> {
- return;// Pas de vérification nécessaire pour AuthorizationForTimeScope
+ // Pas de vérification nécessaire pour AuthorizationForTimeScope
}
case AuthorizationNoRestriction authorizationNoRestriction -> {
- return;// Pas de vérification nécessaire pour AuthorizationNoRestriction
+ // Pas de vérification nécessaire pour AuthorizationNoRestriction
}
default -> throw new IllegalArgumentException("Type d'autorisation non reconnu");
}
@@ -89,20 +92,6 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
authByTypeEntry.setValue(collect);
}
- private static void addStoredAuthorizationReferencesThatCantBeModified(final OreSiReferenceAuthorization entity, final Set<String> authorizationListForCurrentUser, final Map<OperationReferenceType, List<String>> modifiedAuthorizations) {
- Optional.ofNullable(entity)
- .map(OreSiReferenceAuthorization::getReferences)
- .ifPresent(a -> a.forEach((key, value) -> {
- List<String> collect = value.stream()
- .filter(authorizationListForCurrentUser::contains)
- .toList();
- modifiedAuthorizations
- .computeIfAbsent(key, k -> new LinkedList<>())
- .addAll(collect);
- })
- );
- }
-
private static void addStoredAuthorizationAdditionalFilesThatCantBeModified(final OreSiAdditionalFileAuthorization entity, final Set<String> authorizationListForCurrentUser, final Map<OperationAdditionalFileType, List<String>> modifiedAuthorizations) {
Optional.ofNullable(entity)
.map(OreSiAdditionalFileAuthorization::getAdditionalFiles)
@@ -336,16 +325,12 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
}
@Transactional
- public UUID revoke(final String applicationNameOrid, final AuthorizationRequest revokeAuthorizationRequest) {
+ public UUID revoke(
+ final ApplicationAdminUser applicationAdminUser,
+ final String applicationNameOrid,
+ final AuthorizationRequest revokeAuthorizationRequest) {
+ Optional.of(applicationAdminUser).orElseThrow(() -> new NotApplicationUserManagerRightsException(applicationNameOrid));
Application application = getApplication(applicationNameOrid);
- authenticationService.setRoleAdmin();
- CurrentUserRoles rolesForCurrentUser = userRepository.getRolesForCurrentUser();
- authenticationService.setRoleForClient();
- boolean isApplicationCreator = rolesForCurrentUser.memberOf().contains(OreSiRightOnApplicationRole.adminOn(application).getAsSqlRole());
-
- if (!isApplicationCreator) {
- throw new NotApplicationCanSetRightsException(application.getName());
- }
OreSiAuthorization oreSiAuthorization = repository.getRepository(application).authorization().findById(revokeAuthorizationRequest.authorizationId());
Map<String, AuthorizationForScope> authorizationListForCurrentUser = getAuthorizationListForCurrentUser(application);
@@ -353,7 +338,11 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
Map<String, AuthorizationForScope> filteredAuthorizations = oreSiAuthorization.getAuthorizations().entrySet().stream()
.collect(Collectors.toMap(
Map.Entry::getKey,
- entry -> validateAndGetAuthForScope(entry, true, authorizationListForCurrentUser, application)
+ Map.Entry::getValue/*entry -> validateAndGetAuthForScope(
+ entry,
+ true,
+ authorizationListForCurrentUser,
+ application)*/
));
if (filteredAuthorizations.isEmpty()) {
@@ -369,10 +358,10 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
.collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue, (e1, e2) -> e2));
}
- private AuthorizationForScope validateAndGetAuthForScope(Map.Entry<String, AuthorizationForScope> entry,
- boolean isApplicationCreator,
- Map<String, AuthorizationForScope> authorizationListForCurrentUser,
- Application application) {
+ /* private AuthorizationForScope validateAndGetAuthForScope(
+ Map.Entry<String, AuthorizationForScope> entry,
+ Map<String, AuthorizationForScope> authorizationListForCurrentUser,
+ Application application) {
String datatype = entry.getKey();
AuthorizationForScope authForScope = entry.getValue();
@@ -387,7 +376,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
}
return authForScope;
- }
+ }*/
public ImmutableSet<GetAuthorizationResult> getAuthorizations(
final String applicationNameOrId,
@@ -507,7 +496,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
ApplicationUserResult.getApplicationRoles(application)
);
return allUsers.stream()
- .map(user-> ApplicationUserResult.of(
+ .map(user -> ApplicationUserResult.of(
application.getId(),
user,
administratorRoles,
@@ -527,10 +516,10 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
.stream()
.filter(ReferenceScope.NodeDescription::isRoot)
.map(node -> new ReferenceScope.TreeNode(
- node.node_nk(),
- node,
- findChildren(node, referenceScopeBykey)
- )
+ node.node_nk(),
+ node,
+ findChildren(node, referenceScopeBykey)
+ )
)
.filter(ReferenceScope.TreeNode::containsContextNode)
.toList();
@@ -580,6 +569,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
}
throw new BadRoleException("cantDeleteRole", roleForUser.role());
}
+
@Transactional
public OreSiUserResult deleteApplicationRoleUser(final OreSiRoleForUser roleForUser, Application application) {
authenticationService.setRoleAdmin();
@@ -592,33 +582,12 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
}
private OreSiUserResult deleteApplicationCreatorRoleUser(final OreSiRoleForUser oreSiUserRoleApplicationCreator) {
- final boolean canAddApplicationCreatorRole = canAddApplicationCreatorRole(oreSiUserRoleApplicationCreator);
- if (canAddApplicationCreatorRole) {
+ //final boolean canAddApplicationCreatorRole = canAddApplicationCreatorRole(oreSiUserRoleApplicationCreator);
+ //if (canAddApplicationCreatorRole) {
OreSiUser user = authenticationService.deleteUserRightCreateApplication(UUID.fromString(oreSiUserRoleApplicationCreator.userId()), oreSiUserRoleApplicationCreator.applicationPattern());
return new OreSiUserResult(user, userRepository.getRolesForRole(oreSiUserRoleApplicationCreator.userId()));
- }
- throw new NotopenAdomAdminException();
- }
-
- private boolean canAddApplicationCreatorRole(final OreSiRoleForUser oreSiUserRoleApplicationCreator) {
- boolean canAddApplicationCreatorRole = false;
- CurrentUserRoles currentUserRoles = authenticationService.getCurrentUserRoles();
- if (currentUserRoles.isOpenAdomAdmin()) {
- canAddApplicationCreatorRole = true;
- } else if (currentUserRoles.isApplicationCreator()) {
- OreSiUser user = userRepository.findByLogin(oreSiUserRoleApplicationCreator.userId()).orElseGet(() -> userRepository.findById(UUID.fromString(oreSiUserRoleApplicationCreator.userId())));
- if (user.getAuthorizations().stream()
- .anyMatch(p -> Pattern.compile(p)
- .matcher(oreSiUserRoleApplicationCreator.applicationPattern())
- .matches()
- )) {
- canAddApplicationCreatorRole = true;
- } else {
- throw new NotApplicationCreatorRightsException(oreSiUserRoleApplicationCreator.applicationPattern(), user.getAuthorizations());
- }
-
- }
- return canAddApplicationCreatorRole;
+ /*}
+ throw new NotopenAdomAdminException();*/
}
private OreSiUserResult deleteApplicationManagerRoleUser(final OreSiRoleForUser oreSiRoleForApplicationManager, Application application) {
@@ -627,7 +596,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
final OreSiUser user = authenticationService.deleteUserRightApplicationManager(UUID.fromString(oreSiRoleForApplicationManager.userId()), application);
return new OreSiUserResult(user, userRepository.getRolesForRole(oreSiRoleForApplicationManager.userId()));
}
- throw new NotopenAdomAdminException();
+ throw new NotOpenAdomAdminException();//TODO
}
private OreSiUserResult deleteUserManagerRoleUser(final OreSiRoleForUser oreSiUserRoleUserManager, Application application) {
@@ -636,7 +605,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
OreSiUser user = authenticationService.deleteUserRightUserManager(UUID.fromString(oreSiUserRoleUserManager.userId()), application);
return new OreSiUserResult(user, userRepository.getRolesForRole(oreSiUserRoleUserManager.userId()));
}
- throw new NotopenAdomAdminException();
+ throw new NotOpenAdomAdminException();//TODO
}
private OreSiUserResult deleteAdminRoleUser(final OreSiRoleForUser oreSiRoleForUserAdmin) {
@@ -646,7 +615,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
final OreSiUser user = authenticationService.deleteUserRightopenAdomAdmin(UUID.fromString(oreSiRoleForUserAdmin.userId()));
return new OreSiUserResult(user, userRepository.getRolesForRole(oreSiRoleForUserAdmin.userId()));
}
- throw new NotopenAdomAdminException();
+ throw new NotOpenAdomAdminException();//TODO
}
@Transactional
@@ -672,12 +641,12 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
}
private OreSiUserResult addApplicationCreatorRoleUser(final OreSiRoleForUser oreSiUserRoleApplicationCreator) {
- final boolean canAddApplicationCreatorRole = canAddApplicationCreatorRole(oreSiUserRoleApplicationCreator);
- if (canAddApplicationCreatorRole) {
+ //final boolean canAddApplicationCreatorRole = canAddApplicationCreatorRole(oreSiUserRoleApplicationCreator);
+ //if (canAddApplicationCreatorRole) {
OreSiUser user = authenticationService.addUserRightCreateApplication(UUID.fromString(oreSiUserRoleApplicationCreator.userId()), oreSiUserRoleApplicationCreator.applicationPattern());
return new OreSiUserResult(user, userRepository.getRolesForRole(oreSiUserRoleApplicationCreator.userId()));
- }
- throw new NotopenAdomAdminException();
+ /*}
+ throw new NotOpenAdomAdminException();//TODO*/
}
private OreSiUserResult addApplicationManagerRoleUser(final OreSiRoleForUser oreSiUserRoleApplicationManager, Application application) {
@@ -686,7 +655,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
OreSiUser user = authenticationService.addUserRightApplicationManager(UUID.fromString(oreSiUserRoleApplicationManager.userId()), application);
return new OreSiUserResult(user, userRepository.getRolesForRole(oreSiUserRoleApplicationManager.userId()));
}
- throw new NotopenAdomAdminException();
+ throw new NotOpenAdomAdminException();//TODO
}
private OreSiUserResult addUserManagerRoleUser(final OreSiRoleForUser oreSiUserRoleUserManager, Application application) {
@@ -695,7 +664,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
OreSiUser user = authenticationService.addUserRightUserManager(UUID.fromString(oreSiUserRoleUserManager.userId()), application);
return new OreSiUserResult(user, userRepository.getRolesForRole(oreSiUserRoleUserManager.userId()));
}
- throw new NotopenAdomAdminException();
+ throw new NotOpenAdomAdminException();//TODO
}
private OreSiUserResult addAdminRoleUser(final OreSiRoleForUser oreSiRoleForUserAdmin) {
@@ -705,7 +674,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
final OreSiUser user = authenticationService.addUserRightopenAdomAdmin(UUID.fromString(oreSiRoleForUserAdmin.userId()));
return new OreSiUserResult(user, userRepository.getRolesForRole(oreSiRoleForUserAdmin.userId()));
}
- throw new NotopenAdomAdminException();
+ throw new NotOpenAdomAdminException();//TODO
}
public boolean isApplicationCreator(final Application application, final UUID userId) {
@@ -842,7 +811,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
.limit(limit)
.filter(oreSiReferenceAuthorization ->
(user == null || oreSiReferenceAuthorization.getOreSiUsers().stream().anyMatch(uuid -> uuid.toString().equals(user)))
- && (authorizationId == null || oreSiReferenceAuthorization.getId().toString().equals(authorizationId))
+ && (authorizationId == null || oreSiReferenceAuthorization.getId().toString().equals(authorizationId))
)
.map(oreSiAuthorization -> toGetAdditionalFilesAuthorizationResult(oreSiAuthorization, publicAuthorizations, authorizationsForUser))
.collect(ImmutableSet.toImmutableSet());
@@ -966,7 +935,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
String datatype = authorizationEntry.getKey();
AuthorizationForScope authorizationToParse = authorizationEntry.getValue();
AuthorizationParsed authorizationParsed = AuthorizationParsed.of(authorizationToParse);
- authorizationsParsed.computeIfAbsent(datatype, k->new LinkedList<>())
+ authorizationsParsed.computeIfAbsent(datatype, k -> new LinkedList<>())
.add(authorizationParsed);
}
}
@@ -1000,6 +969,7 @@ public class AuthorizationService implements ServiceContainerBean, fr.inra.oresi
Set<String> applicationCreator = currentUser.getAuthorizations();
return new AuthorizationsForSystemUser(currentUserRoles, applicationCreator);
}
+
@Override
public PrivilegeAssessorDomainForSystem getPrivilegeAssessorForSystem(
PrivilegeSystemDomain privilegeDomain
diff --git a/src/main/java/fr/inra/oresing/rest/services/RightsRequestService.java b/src/main/java/fr/inra/oresing/rest/services/RightsRequestService.java
index 45314542ce351b34659668c88d8386f95024a9ee..fc52624902a1370ddde507e835bbd324eb56a53f 100644
--- a/src/main/java/fr/inra/oresing/rest/services/RightsRequestService.java
+++ b/src/main/java/fr/inra/oresing/rest/services/RightsRequestService.java
@@ -75,7 +75,7 @@ public class RightsRequestService implements ServiceContainerBean{
private RightsRequestResult getRightsRequestResult(final RightsRequest rightsRequest, final Application application) {
Map<String, List<AuthorizationParsed>> authorizationsParsed = new HashMap<>();
- serviceContainer.authorizationService().authorizationsToParsedAuthorizations(
+ AuthorizationService.authorizationsToParsedAuthorizations(
List.of(rightsRequest.getRightsRequest()),
authorizationsParsed);
return new RightsRequestResult(
diff --git a/src/main/java/fr/inra/oresing/rest/services/ServiceContainer.java b/src/main/java/fr/inra/oresing/rest/services/ServiceContainer.java
index bff87b18b4374458247f51ac40d96d287cfd4e83..b17f88ef82303d93651e6c815152c21fb60404d3 100644
--- a/src/main/java/fr/inra/oresing/rest/services/ServiceContainer.java
+++ b/src/main/java/fr/inra/oresing/rest/services/ServiceContainer.java
@@ -20,7 +20,7 @@ public record ServiceContainer(
RelationalService relationalService,
Email emailService
) {
- public static final ServiceContainer of(
+ public static ServiceContainer of(
ApplicationService applicationService,
AuthorizationService authorizationService,
AuthenticationService authenticationService,
diff --git a/src/main/resources/fr/inra/oresing/client/OpenAdomClient.groovy b/src/main/resources/fr/inra/oresing/client/OpenAdomClient.groovy
index 5ec77536798c4f517415922e31f9df380f0f41b3..f5a53938f9de19d7a2bc44bc446336c664c31566 100644
--- a/src/main/resources/fr/inra/oresing/client/OpenAdomClient.groovy
+++ b/src/main/resources/fr/inra/oresing/client/OpenAdomClient.groovy
@@ -1,46 +1,46 @@
package fr.inra.oresing.client
-import com.fasterxml.jackson.core.type.TypeReference;
+import com.fasterxml.jackson.core.type.TypeReference
import com.fasterxml.jackson.databind.ObjectMapper
-import org.apache.commons.io.file.AccumulatorPathVisitor;
-import org.apache.commons.io.file.Counters;
-import org.apache.hc.client5.http.classic.methods.HttpPost;
-import org.apache.hc.client5.http.cookie.BasicCookieStore;
-import org.apache.hc.client5.http.entity.mime.FileBody;
+import org.apache.commons.io.file.AccumulatorPathVisitor
+import org.apache.commons.io.file.Counters
+import org.apache.hc.client5.http.classic.methods.HttpPost
+import org.apache.hc.client5.http.cookie.BasicCookieStore
+import org.apache.hc.client5.http.entity.mime.FileBody
import org.apache.hc.client5.http.entity.mime.MultipartEntityBuilder
-import org.apache.hc.client5.http.impl.classic.HttpClients;
-import org.apache.hc.core5.http.ClassicHttpRequest;
-import org.apache.hc.core5.http.ClassicHttpResponse;
-import org.apache.hc.core5.http.HttpEntity;
-import org.apache.hc.core5.http.io.HttpClientResponseHandler;
-import org.apache.hc.core5.http.io.entity.EntityUtils;
+import org.apache.hc.client5.http.impl.classic.HttpClients
+import org.apache.hc.core5.http.ClassicHttpRequest
+import org.apache.hc.core5.http.ClassicHttpResponse
+import org.apache.hc.core5.http.HttpEntity
+import org.apache.hc.core5.http.io.HttpClientResponseHandler
+import org.apache.hc.core5.http.io.entity.EntityUtils
import org.apache.hc.core5.http.io.support.ClassicRequestBuilder
-import java.nio.file.Files;
+import java.nio.file.Files
import java.nio.file.Path
-import java.util.stream.Collectors;
+import java.util.stream.Collectors
@Grab(group = "commons-io", module = "commons-io", version = "2.8.0")
@Grab(group = "org.apache.httpcomponents.client5", module = "httpclient5", version = "5.2.1")
-ClientConfiguration clientConfiguration = readConfiguration();
+ClientConfiguration clientConfiguration = readConfiguration()
-String applicationName = clientConfiguration.applicationName();
-URI instanceUrl = clientConfiguration.instanceUrl();
+String applicationName = clientConfiguration.applicationName()
+URI instanceUrl = clientConfiguration.instanceUrl()
-String login;
-String password;
-boolean interactive = true;
-Scanner scanner = new Scanner(System.in);
+String login
+String password
+boolean interactive = true
+Scanner scanner = new Scanner(System.in)
if (interactive) {
- System.out.println("Veuillez saisir les informations de connexion à " + instanceUrl);
- System.out.print("identifiant : ");
- login = scanner.nextLine();
- System.out.print("mot de passe : ");
- password = scanner.nextLine();
+ System.out.println("Veuillez saisir les informations de connexion à " + instanceUrl)
+ System.out.print("identifiant : ")
+ login = scanner.nextLine()
+ System.out.print("mot de passe : ")
+ password = scanner.nextLine()
} else {
- login = "poussin";
- password = "xxxx";
+ login = "poussin"
+ password = "xxxx"
}
BasicCookieStore cookieStore = new BasicCookieStore()
@@ -120,89 +120,89 @@ HttpClients.custom()
}
ClientConfiguration readConfiguration() throws IOException {
- File configurationFile = new File("openAdom-client-configuration.json");
+ File configurationFile = new File("openAdom-client-configuration.json")
ClientConfiguration clientConfiguration = new ObjectMapper()
.readValue(
configurationFile,
ClientConfiguration.class
- );
- return clientConfiguration;
+ )
+ return clientConfiguration
}
List<Command> newCommands(List<String> data/*, List<String> dataTypes*/) {
List<Command> dataCommands = data.stream()
.flatMap(refType -> getDataCommands(refType).stream())
- .toList();
+ .toList()
- List<Command> commands = new LinkedList<>();
- commands.addAll(dataCommands);
+ List<Command> commands = new LinkedList<>()
+ commands.addAll(dataCommands)
- return commands;
+ return commands
}
List<Command> getUploadDataCommands(String dataType) {
- Path dataDirectoryForDataType = Path.of(dataType);
- List<Command> commands;
+ Path dataDirectoryForDataType = Path.of(dataType)
+ List<Command> commands
if (dataDirectoryForDataType.toFile().exists()) {
if (dataDirectoryForDataType.toFile().isDirectory()) {
- SortedSet<Path> csvFilePaths = findCsvFilePathsInDirectory(dataDirectoryForDataType);
+ SortedSet<Path> csvFilePaths = findCsvFilePathsInDirectory(dataDirectoryForDataType)
commands = csvFilePaths.stream()
.map(Path::toFile)
.map(dataFile -> newUploadDataCommand(dataType, dataFile))
- .toList();
+ .toList()
} else {
- logError("le répertoire " + dataDirectoryForDataType + " est un fichier mais il devrait être un dossier. On l’ignore.");
- commands = Collections.emptyList();
+ logError("le répertoire " + dataDirectoryForDataType + " est un fichier mais il devrait être un dossier. On l’ignore.")
+ commands = Collections.emptyList()
}
} else {
- log("le répertoire " + dataDirectoryForDataType + " n’existe pas. Pas de données à importer pour " + dataType);
- commands = Collections.emptyList();
+ log("le répertoire " + dataDirectoryForDataType + " n’existe pas. Pas de données à importer pour " + dataType)
+ commands = Collections.emptyList()
}
- return commands;
+ return commands
}
List<Command> getDataCommands(String dataName) {
- File dir = new File(dataName);
- File[] csvFiles = dir.listFiles((dir1, name) -> name.endsWith(".csv"));
- List<Command> commands = new LinkedList<>();
+ File dir = new File(dataName)
+ File[] csvFiles = dir.listFiles((dir1, name) -> name.endsWith(".csv"))
+ List<Command> commands = new LinkedList<>()
if (csvFiles == null) {
- return List.of();
+ return List.of()
}
Arrays.stream(csvFiles).forEach(refFile -> {
if (refFile.exists()) {
- Set<Path> csvFilePathsInDirectory;
+ Set<Path> csvFilePathsInDirectory
if (refFile.isFile()) {
- csvFilePathsInDirectory = Collections.singleton(refFile.toPath());
+ csvFilePathsInDirectory = Collections.singleton(refFile.toPath())
} else if (refFile.isDirectory()) {
- csvFilePathsInDirectory = findCsvFilePathsInDirectory(refFile.toPath());
+ csvFilePathsInDirectory = findCsvFilePathsInDirectory(refFile.toPath())
} else {
- throw new IllegalStateException("ne comprend pas de quel type est " + refFile);
+ throw new IllegalStateException("ne comprend pas de quel type est " + refFile)
}
commands.addAll(csvFilePathsInDirectory.stream()
.map(path -> newUploadDataCommand(dataName, path.toFile()))
.toList()
- );
+ )
} else {
- logError("le fichier %s n’existe pas, on ignore l’import du référentiel %s".formatted(refFile, dataName));
- commands.addAll(Collections.emptyList());
+ logError("le fichier %s n’existe pas, on ignore l’import du référentiel %s".formatted(refFile, dataName))
+ commands.addAll(Collections.emptyList())
}
- });
- return commands;
+ })
+ return commands
}
Command newUploadDataCommand(String dataName, File dataFile) {
return new Command() {
@Override
- public String getDescription() {
- return "Téléversement de %s pour alimenter le référentiel %s".formatted(dataFile, dataName);
+ String getDescription() {
+ return "Téléversement de %s pour alimenter le référentiel %s".formatted(dataFile, dataName)
}
@Override
- public ClassicHttpRequest getRequest(UriFactory uriFactory) {
- HttpPost httpPost = new HttpPost(uriFactory.forUploadingData(dataName));
- FileBody refFileBody = new FileBody(dataFile);
+ ClassicHttpRequest getRequest(UriFactory uriFactory) {
+ HttpPost httpPost = new HttpPost(uriFactory.forUploadingData(dataName))
+ FileBody refFileBody = new FileBody(dataFile)
HttpEntity reqEntity = MultipartEntityBuilder.create()
.addPart("file", refFileBody)
.addTextBody("params", """
@@ -211,26 +211,26 @@ Command newUploadDataCommand(String dataName, File dataFile) {
"topublish":true
}
""")
- .build();
- httpPost.setEntity(reqEntity);
- return httpPost;
+ .build()
+ httpPost.setEntity(reqEntity)
+ return httpPost
}
List<Map<String, Object>> parseJsonInResponseBodyForErrorMessagesAndParams(ClassicHttpResponse response) {
try (InputStream inputStream = response.getEntity().getContent()) {
List<Map<String, Object>> responseBody = new ObjectMapper().readValue(inputStream, new TypeReference<List<Map<String, Object>>>() {
- });
+ })
return responseBody.stream()
.map(record -> {
- Map<String, Object> resultMap = new HashMap<>();
- resultMap.put("message", ((Map<String, Object>) record.get("validationCheckResult")).get("message").toString());
- resultMap.put("messageParams", (Map<String, Object>) ((Map<String, Object>) record.get("validationCheckResult")).get("messageParams"));
- return resultMap;
+ Map<String, Object> resultMap = new HashMap<>()
+ resultMap.put("message", ((Map<String, Object>) record.get("validationCheckResult")).get("message").toString())
+ resultMap.put("messageParams", (Map<String, Object>) ((Map<String, Object>) record.get("validationCheckResult")).get("messageParams"))
+ return resultMap
})
- .collect(Collectors.toList());
+ .collect(Collectors.toList())
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
@@ -258,40 +258,40 @@ Command newUploadDataCommand(String dataName, File dataFile) {
}
null
}
- };
+ }
}
SortedSet<Path> findCsvFilePathsInDirectory(Path directory) {
try {
- AccumulatorPathVisitor accumulatorPathVisitor = new AccumulatorPathVisitor(Counters.longPathCounters());
- Files.walkFileTree(directory, accumulatorPathVisitor);
+ AccumulatorPathVisitor accumulatorPathVisitor = new AccumulatorPathVisitor(Counters.longPathCounters())
+ Files.walkFileTree(directory, accumulatorPathVisitor)
SortedSet<Path> csvFilePathsInDirectory = accumulatorPathVisitor.getFileList().stream()
.filter(path -> path.getFileName().toString().endsWith(".csv"))
- .collect(Collectors.toCollection(TreeSet::new));
- return Collections.unmodifiableSortedSet(csvFilePathsInDirectory);
+ .collect(Collectors.toCollection(TreeSet::new))
+ return Collections.unmodifiableSortedSet(csvFilePathsInDirectory)
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
void fail(String message) {
- logError(message);
- System.exit(1);
+ logError(message)
+ System.exit(1)
}
static void logError(String string) {
- System.err.println(string);
+ System.err.println(string)
}
static void log(String message) {
- System.out.println(message);
+ System.out.println(message)
}
<T> T parseJsonInResponseBody(ClassicHttpResponse response, TypeReference<T> valueTypeRef) {
try (InputStream inputStream = response.getEntity().getContent()) {
- return new ObjectMapper().readValue(inputStream, valueTypeRef);
+ return new ObjectMapper().readValue(inputStream, valueTypeRef)
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
@@ -329,19 +329,19 @@ record UriFactory(URI instanceUrl, String applicationName) {
URI newUri(String endpoint) {
try {
- return new URI("%s/api/v1/%s".formatted(instanceUrl, endpoint));
+ return new URI("%s/api/v1/%s".formatted(instanceUrl, endpoint))
} catch (URISyntaxException e) {
- throw new RuntimeException("ne devrait pas arriver", e);
+ throw new RuntimeException("ne devrait pas arriver", e)
}
}
- public URI forLogin() {
- return newUri("login");
+ URI forLogin() {
+ return newUri("login")
}
- public URI forUploadingData(String dataType) {
- String endpoint = "applications/%s/data/%s".formatted(applicationName, dataType);
- return newUri(endpoint);
+ URI forUploadingData(String dataType) {
+ String endpoint = "applications/%s/data/%s".formatted(applicationName, dataType)
+ return newUri(endpoint)
}
/*public URI forApplicationReferenceTypes(String applicationName) {
@@ -349,9 +349,9 @@ record UriFactory(URI instanceUrl, String applicationName) {
return newUri(endpoint);
}*/
- public URI forApplicationDataTypes(String applicationName) {
- String endpoint = "applications/%s/data".formatted(applicationName);
- return newUri(endpoint);
+ URI forApplicationDataTypes(String applicationName) {
+ String endpoint = "applications/%s/data".formatted(applicationName)
+ return newUri(endpoint)
}
}
diff --git a/src/test/java/fr/inra/oresing/domain/application/configuration/SubmissionTest.java b/src/test/java/fr/inra/oresing/domain/application/configuration/SubmissionTest.java
index 90fd64f65084ff6bdc79ee0ac13ca22c570fd65c..5955b26012109260595e1a213776b83832552b9b 100644
--- a/src/test/java/fr/inra/oresing/domain/application/configuration/SubmissionTest.java
+++ b/src/test/java/fr/inra/oresing/domain/application/configuration/SubmissionTest.java
@@ -41,22 +41,22 @@ class SubmissionTest {
@Test
void testPatternGroups(){
List<Submission.PatternPosition> groupPositions = submission.fileNameParsing().patternGroups();
- Assertions.assertEquals(4, groupPositions.size());
- Assertions.assertEquals("[[0, 4], [5, 9], [10, 14], [15, 19]]", groupPositions.toString());
+ assertEquals(4, groupPositions.size());
+ assertEquals("[[0, 4], [5, 9], [10, 14], [15, 19]]", groupPositions.toString());
}
@Test
void testPatternToBeReplacedByGroupCapture(){
- Assertions.assertEquals("%1$s_%2$s_%3$s_%4$s.csv", submission.fileNameParsing().patternToBeReplacedByGroupCapture());
+ assertEquals("%1$s_%2$s_%3$s_%4$s.csv", submission.fileNameParsing().patternToBeReplacedByGroupCapture());
}
@Test
void testGroupCount(){
- Assertions.assertEquals(4, submission.fileNameParsing().groupCount());
+ assertEquals(4, submission.fileNameParsing().groupCount());
}
@Test
void testOrderedGroups(){
LinkedList<String> orderedGroups = submission.fileNameParsing().orderedGroups();
- Assertions.assertArrayEquals(List.of("projet","chemin",ConfigurationSchemaNode.OA_START_DATE_MATCH_PATTERN, ConfigurationSchemaNode.OA_END_DATE_MATCH_PATTERN
+ assertArrayEquals(List.of("projet","chemin",ConfigurationSchemaNode.OA_START_DATE_MATCH_PATTERN, ConfigurationSchemaNode.OA_END_DATE_MATCH_PATTERN
).toArray(new String[0]), orderedGroups.toArray(new String[0]));
}
@@ -65,14 +65,14 @@ class SubmissionTest {
submission.parseFileName("leProjet_leSite_01-01-1984_05-01-1984.csv", binaryFileDataset);
assertTrue(binaryFileDataset.getRequiredAuthorizations().get("projet").contains(Ltree.fromSql("leProjet")));
assertTrue(binaryFileDataset.getRequiredAuthorizations().get("sites").contains(Ltree.fromSql("leSite")));
- assertTrue(binaryFileDataset.getFrom().equals("1984-01-01 00:00:00"));
- assertTrue(binaryFileDataset.getTo().equals("1984-01-05 00:00:00"));
+ assertEquals("1984-01-01 00:00:00", binaryFileDataset.getFrom());
+ assertEquals("1984-01-05 00:00:00", binaryFileDataset.getTo());
//do nothing if already done
submission.parseFileName("leProjet2_leSite2_01-01-1985_05-01-1985.csv", binaryFileDataset);
assertTrue(binaryFileDataset.getRequiredAuthorizations().get("projet").contains(Ltree.fromSql("leProjet")));
assertTrue(binaryFileDataset.getRequiredAuthorizations().get("sites").contains(Ltree.fromSql("leSite")));
- assertTrue(binaryFileDataset.getFrom().equals("1984-01-01 00:00:00"));
- assertTrue(binaryFileDataset.getTo().equals("1984-01-05 00:00:00"));
+ assertEquals("1984-01-01 00:00:00", binaryFileDataset.getFrom());
+ assertEquals("1984-01-05 00:00:00", binaryFileDataset.getTo());
}
@Test
diff --git a/src/test/java/fr/inra/oresing/domain/checker/type/ReferenceTypeTest.java b/src/test/java/fr/inra/oresing/domain/checker/type/ReferenceTypeTest.java
index 5f5e8c50d29e4dc0ae6a98ee9f6552c2d1db8714..d9a27bb45304d462320a1c274bab563874baf834 100644
--- a/src/test/java/fr/inra/oresing/domain/checker/type/ReferenceTypeTest.java
+++ b/src/test/java/fr/inra/oresing/domain/checker/type/ReferenceTypeTest.java
@@ -33,9 +33,6 @@ class ReferenceTypeTest {
String badValue = "annecy";
String goodValueNotLabel = "LéMan";
uuid1 = UUID.randomUUID();
- UUID uuid2 = UUID.randomUUID();
- UUID uuid3 = UUID.randomUUID();
- UUID uuid4 = UUID.randomUUID();
referenceValues = new ImmutableMap.Builder()
.put(new DataValue.LineIdentityColumnName(Ltree.fromSql(goodValue), Ltree.fromSql(goodValue)), ImmutableSet.of(uuid1))
.build();
diff --git a/src/test/java/fr/inra/oresing/persistence/AuthenticationServiceTest.java b/src/test/java/fr/inra/oresing/persistence/AuthenticationServiceTest.java
index 5c0a54e60df32c0dff95392b04dc9139dc11abee..8c129eb0f9bf92c9346a72fa5431d59f7ad83e84 100644
--- a/src/test/java/fr/inra/oresing/persistence/AuthenticationServiceTest.java
+++ b/src/test/java/fr/inra/oresing/persistence/AuthenticationServiceTest.java
@@ -76,7 +76,7 @@ public class AuthenticationServiceTest {
@Test
public void testSetRole() {
OreSiRoleToAccessDatabase anonymousRole = authenticationService.setRole(OreSiRole.anonymous());
- Assertions.assertEquals(OreSiRole.anonymous(), anonymousRole);
+ assertEquals(OreSiRole.anonymous(), anonymousRole);
}
@Test
diff --git a/src/test/java/fr/inra/oresing/persistence/data/read/bundle/FileContentTest.java b/src/test/java/fr/inra/oresing/persistence/data/read/bundle/FileContentTest.java
index 2d75f23c252462999dcb4c1e9b1d61846b09c3aa..d0dd6935dff2db83e84db6730a228bd82fb979d7 100644
--- a/src/test/java/fr/inra/oresing/persistence/data/read/bundle/FileContentTest.java
+++ b/src/test/java/fr/inra/oresing/persistence/data/read/bundle/FileContentTest.java
@@ -45,19 +45,19 @@ class FileContentTest {
Application application = Mockito.mock(Application.class);
Mockito.doReturn(Optional.of(submission)).when(application).findSubmission(dataName);
String request = FileContent.buildFileNameRequest(application, dataName);
- Assertions.assertEquals("""
- SELECT DISTINCT ON (rv.binaryfile)
- format('%s_%s_%s_%s.csv',
- ((bf.authorization).requiredauthorizations).projet,
- ((bf.authorization).requiredauthorizations).chemin,
- TO_CHAR(lower((bf.authorization).timescope),'yyyy-MM-dd'),
- TO_CHAR(upper((bf.authorization).timescope),'yyyy-MM-dd')
- ) as "fileName",
- convert_from(decode(encode(bf.filedata, 'escape'), 'base64'), 'UTF8') AS "fileContent"
- FROM null.referencevalue rv
- JOIN null.binaryfile bf ON bf.id = rv.binaryfile
- WHERE rv.referencetype = 'data'
- ORDER BY rv.binaryfile, bf.updatedate DESC;
+ assertEquals("""
+ SELECT DISTINCT ON (rv.binaryfile)
+ format('%1$s_%2$s_%3$s_%4$s.csv',
+ ((bf."authorization").requiredauthorizations).projet[1],
+ ((bf."authorization").requiredauthorizations).sites[1],
+ TO_CHAR(lower((bf."authorization").timescope),'yyyy-MM-dd'),
+ TO_CHAR(upper((bf."authorization").timescope),'yyyy-MM-dd')
+ ) as "fileName",
+ convert_from(decode(encode(bf.filedata, 'escape'), 'base64'), 'UTF8') AS "fileContent"
+ FROM null.referencevalue rv
+ JOIN null.binaryfile bf ON bf.id = rv.binaryfile
+ WHERE rv.referencetype = 'data'
+ ORDER BY rv.binaryfile, bf.updatedate DESC;
""", request);
}
diff --git a/src/test/java/fr/inra/oresing/persistence/index/AuthorizationIndexTest.java b/src/test/java/fr/inra/oresing/persistence/index/AuthorizationIndexTest.java
index d7bfb1830aa455d870c511e1dbf064b7419da597..df59246407d0c435ef98a641d0f8041f5c424227 100644
--- a/src/test/java/fr/inra/oresing/persistence/index/AuthorizationIndexTest.java
+++ b/src/test/java/fr/inra/oresing/persistence/index/AuthorizationIndexTest.java
@@ -128,7 +128,7 @@ class AuthorizationIndexTest {
);
AuthorizationForScope authorization = new AuthorizationForReferenceScopeAndTimeScope(Set.of(), authorizationScope, timescope);
String sqlFilter = authorizationIndex.sqlFilterForAuthorization("pem", authorization, false);
- Assertions.assertEquals("""
+ assertEquals("""
referencetype = 'pem'
AND ("authorization").requiredauthorizations.projet @> ARRAY['projetKprojet_atlantique', 'projetKprojet_mediterranee']::ltree[]
AND ("authorization").requiredauthorizations.sites @> ARRAY['type_de_sitesKplateforme', 'type_de_sitesKlaboratoire']::ltree[]
@@ -146,7 +146,7 @@ class AuthorizationIndexTest {
);
AuthorizationForScope authorization = new AuthorizationForReferenceScope(Set.of(), authorizationScope);
String sqlFilter = authorizationIndex.sqlFilterForAuthorization("pem", authorization, false);
- Assertions.assertEquals("""
+ assertEquals("""
referencetype = 'pem'
AND ("authorization").requiredauthorizations.projet IS NULL
AND ("authorization").requiredauthorizations.sites @> ARRAY['type_de_sitesKplateforme']::ltree[]""",
diff --git a/src/test/java/fr/inra/oresing/rest/ApplicationConfigurationServiceTest.java b/src/test/java/fr/inra/oresing/rest/ApplicationConfigurationServiceTest.java
index 02c1fd0def1b60715b85d1dfabf460999901e89b..30b034e23cd56fc6d0c3f928b724ffcd4b6efa61 100644
--- a/src/test/java/fr/inra/oresing/rest/ApplicationConfigurationServiceTest.java
+++ b/src/test/java/fr/inra/oresing/rest/ApplicationConfigurationServiceTest.java
@@ -134,7 +134,7 @@ public class ApplicationConfigurationServiceTest {
.collectList()
.block()
.stream().collect(Collectors.joining("\n")));
- Assertions.assertEquals("""
+ assertEquals("""
1.0.5
3.0.1
3.0.1
@@ -169,7 +169,7 @@ public class ApplicationConfigurationServiceTest {
private void testConfiguration(ReactiveProgression.CreateApplicationProgression progression, String config, boolean expectedValidity) throws IOException {
byte[] configBytes = config.getBytes(StandardCharsets.UTF_8);
FileBomResolver fileBomResolver = FileBomResolver.of(new ByteArrayInputStream(configBytes));
- Application application = service.parseConfigurationBytes("", progression, fileBomResolver);
+ Application application = ApplicationConfigurationService.parseConfigurationBytes("", progression, fileBomResolver);
System.out.println(application);
//assertEquals(expectedValidity, application.isValid(), "La configuration '" + config + "' devrait être " + (expectedValidity ? "valide" : "invalide"));
}
@@ -558,7 +558,7 @@ public class ApplicationConfigurationServiceTest {
final List<String> expectedComponents = Arrays.stream(new String[]{"site_bassin", "date", "tel_experimental_site", "site", "bassin", "projet", "espece", "ordre_affichage", "chemin", "tel_experimental_network", "plateforme", "is_float_value", "tel_value"})
.collect(Collectors.toCollection(LinkedList::new));
final Collection<String> givenComponents = (Collection<String>) validationError.getParam("knownComponents");
- Assertions.assertIterableEquals(expectedComponents, givenComponents);
+ assertIterableEquals(expectedComponents, givenComponents);
});
}
@@ -1078,7 +1078,7 @@ public class ApplicationConfigurationServiceTest {
final List<String> expectedComponents = Arrays.stream(new String[]{"site_bassin", "date", "tel_experimental_site", "site", "bassin", "projet", "espece", "ordre_affichage", "chemin", "tel_experimental_network", "plateforme", "is_float_value", "tel_value"})
.collect(Collectors.toCollection(LinkedList::new));
final Collection<String> givenComponents = (Collection<String>) validationError.getParam("knownComponents");
- Assertions.assertIterableEquals(expectedComponents, givenComponents);
+ assertIterableEquals(expectedComponents, givenComponents);
});
}
diff --git a/src/test/java/fr/inra/oresing/rest/AuthorizationResourcesTest.java b/src/test/java/fr/inra/oresing/rest/AuthorizationResourcesTest.java
index 53a8bb6d56435b143de9da1c5fb9d0e879eed0aa..893a3a1ac5094d5b6a92d53587e40ec7336da779 100644
--- a/src/test/java/fr/inra/oresing/rest/AuthorizationResourcesTest.java
+++ b/src/test/java/fr/inra/oresing/rest/AuthorizationResourcesTest.java
@@ -3,11 +3,11 @@ package fr.inra.oresing.rest;
import com.jayway.jsonpath.JsonPath;
import fr.inra.oresing.OreSiNg;
import fr.inra.oresing.TestDatabaseConfig;
+import fr.inra.oresing.domain.authorization.privilegeassessor.exception.NotApplicationCreatorRightsException;
import fr.inra.oresing.persistence.ApplicationRepository;
import fr.inra.oresing.persistence.AuthenticationService;
import fr.inra.oresing.persistence.SqlService;
import fr.inra.oresing.persistence.UserRepository;
-import fr.inra.oresing.domain.exceptions.authentication.authentication.NotApplicationCreatorRightsException;
import fr.inra.oresing.rest.reactive.ReactiveTypeError;
import io.jsonwebtoken.Jwts;
import io.jsonwebtoken.security.Keys;
diff --git a/src/test/java/fr/inra/oresing/rest/Fixtures.java b/src/test/java/fr/inra/oresing/rest/Fixtures.java
index 14e24e162256ceff52bf7e73672a6d234c4e3013..d20d9c2953ac2ad3be61c7fcc7cd086bb05962cd 100644
--- a/src/test/java/fr/inra/oresing/rest/Fixtures.java
+++ b/src/test/java/fr/inra/oresing/rest/Fixtures.java
@@ -475,7 +475,7 @@ public class Fixtures {
}
public static String getSWCRepositoryResourceName() {
- return String.format("/data/repeatedcolumns/SWC_truncated.csv");
+ return "/data/repeatedcolumns/SWC_truncated.csv";
}
public static Map<String, List<String>> getRepeatedColumnsDataErrorsStringReplace() {
diff --git a/src/test/java/fr/inra/oresing/rest/OreSiResourcesTest.java b/src/test/java/fr/inra/oresing/rest/OreSiResourcesTest.java
index e7a946280b54574ba5e195fcb2727775689be10e..98a25f93b4217b110e17b41a47d486cec7c73fb5 100644
--- a/src/test/java/fr/inra/oresing/rest/OreSiResourcesTest.java
+++ b/src/test/java/fr/inra/oresing/rest/OreSiResourcesTest.java
@@ -1313,22 +1313,22 @@ public class OreSiResourcesTest {
mockMvc.perform(get("/api/v1/applications/monsore/additionalFiles/fichiers")
.cookie(authCookie))
- .andExpect(jsonPath("$.users[*].label", Matchers.contains("_public_",
+ .andExpect(jsonPath("$.users[*].label", contains("_public_",
"lambda",
"poussin",
"withrigths")))
- .andExpect(jsonPath("$.additionalFileName", Matchers.is("fichiers")))
- .andExpect(jsonPath("$.additionalBinaryFiles[0].additionalBinaryFileForm.age", Matchers.is("10")));
+ .andExpect(jsonPath("$.additionalFileName", is("fichiers")))
+ .andExpect(jsonPath("$.additionalBinaryFiles[0].additionalBinaryFileForm.age", is("10")));
mockMvc.perform(get("/api/v1/applications/monsore/additionalFiles/fichiers")
.cookie(withRigthsCookie))
.andExpect(status().is2xxSuccessful())
- .andExpect(jsonPath("$.users[*].label", Matchers.contains("_public_",
+ .andExpect(jsonPath("$.users[*].label", contains("_public_",
"lambda",
"poussin",
"withrigths")))
- .andExpect(jsonPath("$.additionalFileName", Matchers.is("fichiers")))
- .andExpect(jsonPath("$.additionalBinaryFiles[0].additionalBinaryFileForm.age", Matchers.is("10")));
+ .andExpect(jsonPath("$.additionalFileName", is("fichiers")))
+ .andExpect(jsonPath("$.additionalBinaryFiles[0].additionalBinaryFileForm.age", is("10")));
final String error = Objects.requireNonNull(mockMvc.perform(get("/api/v1/applications/monsore/additionalFiles/fichiers")
.cookie(lambdaCookie))
@@ -1486,7 +1486,7 @@ public class OreSiResourcesTest {
SiOreAuthorizationRequestException cause = (SiOreAuthorizationRequestException) servletException.getCause();
AuthorizationRequestException requestException = cause.getException();
Assertions.assertEquals(AuthorizationRequestException.MISSING_REQUIRED_AUTHORIZATION, requestException);
- Assertions.assertTrue(((Map<String, List<Ltree>>) cause.getParams().get("missingRequiredAuthorizations")).get("projet").getFirst().getSql().equals("projet_manche"));
+ Assertions.assertEquals("projet_manche", ((Map<String, List<Ltree>>) cause.getParams().get("missingRequiredAuthorizations")).get("projet").getFirst().getSql());
}
String createRights = getJsonRightsforRestrictions(
diff --git a/src/test/java/fr/inra/oresing/rest/model/authorization/CreateAuthorizationRequestTest.java b/src/test/java/fr/inra/oresing/rest/model/authorization/CreateAuthorizationRequestTest.java
index 3d945775e2f99963f85681ae6d183beb611502fe..6be15e1d58d1b013e3e61ae3a713d48b57bb5985 100644
--- a/src/test/java/fr/inra/oresing/rest/model/authorization/CreateAuthorizationRequestTest.java
+++ b/src/test/java/fr/inra/oresing/rest/model/authorization/CreateAuthorizationRequestTest.java
@@ -1,5 +1,6 @@
package fr.inra.oresing.rest.model.authorization;
+import com.fasterxml.jackson.databind.JsonNode;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.google.common.io.Resources;
import fr.inra.oresing.domain.OreSiAuthorization;
@@ -15,8 +16,12 @@ import fr.inra.oresing.persistence.JsonRowMapper;
import fr.inra.oresing.persistence.data.read.DataRepositoryWithBuffer;
import fr.inra.oresing.rest.model.authorization.exception.AuthorizationRequestError;
import fr.inra.oresing.rest.model.authorization.request.AuthorizationRequestBuilder;
+import lombok.SneakyThrows;
+import org.json.JSONException;
import org.junit.jupiter.api.*;
import org.mockito.Mockito;
+import org.skyscreamer.jsonassert.JSONAssert;
+import org.skyscreamer.jsonassert.JSONCompareMode;
import java.io.IOException;
import java.net.URL;
@@ -154,38 +159,45 @@ class CreateAuthorizationRequestTest {
errors
)
.build(createAuthorizationRequest, dataRepositoryWithBuffer);
- /*Assertions.assertEquals("""
+ String expectedJson = """
{
- "authorizationId" : "e7570009-35fb-489d-ad3b-5bb335e7c5d5",
- "name" : "une submissionScope sur le référentiel monsore",
- "description" : null,
- "applicationId" : "41e8f1dd-4b3c-4bc7-9013-1309b4714d9d",
- "userId" : [ "f7570009-38fb-489d-ad3b-5bb335e7c5d5" ],
- "authorizationForAll" : {
- "authorizationForAll" : {
- "type_de_sites" : [ "extraction" ],
- "sites" : [ "extraction" ]
- }
- },
- "authorizationWithRestriction" : {
- "authorizationForScope" : {
- "pem" : {
- "operationTypes" : [ "extraction", "depot" ],
- "authorizationScope" : {
- "projet" : [ {
- "sql" : "projet_atlantique"
- }, {
- "sql" : "projet_manche"
- } ]
- },
- "timeScope" : {
- "range" : {
- "empty" : true
- }
- }
- }
- }
- }
- }""", new ObjectMapper().writerWithDefaultPrettyPrinter().writeValueAsString(authorizationRequest));*/
+ "authorizationId" : "e7570009-35fb-489d-ad3b-5bb335e7c5d5",
+ "name" : "une submissionScope sur le référentiel monsore",
+ "description" : null,
+ "applicationId" : "41e8f1dd-4b3c-4bc7-9013-1309b4714d9d",
+ "userId" : [ "f7570009-38fb-489d-ad3b-5bb335e7c5d5" ],
+ "authorizationForAll" : {
+ "authorizationForAll" : {
+ "type_de_sites" : [ "extraction" ],
+ "sites" : [ "extraction" ]
+ }
+ },
+ "authorizationWithRestriction" : {
+ "authorizationForScope" : {
+ "pem" : {
+ "operationTypes" : [ "depot", "extraction" ],
+ "authorizationScope" : {
+ "projet" : [ {
+ "sql" : "projet_atlantique"
+ }, {
+ "sql" : "projet_manche"
+ } ]
+ },
+ "timeScope" : {
+ "range" : {
+ "empty" : true
+ }
+ }
+ }
+ }
+ }
+ }""";
+
+ String actualJson = new ObjectMapper().writerWithDefaultPrettyPrinter().writeValueAsString(authorizationRequest);
+ try {
+ JSONAssert.assertEquals(expectedJson, actualJson, JSONCompareMode.LENIENT);
+ } catch (JSONException e) {
+ throw new RuntimeException(e);
+ }
}
}
\ No newline at end of file
diff --git a/src/test/java/fr/inra/oresing/rest/model/data/DownloadDatasetQueryAdvancedSearchTest.java b/src/test/java/fr/inra/oresing/rest/model/data/DownloadDatasetQueryAdvancedSearchTest.java
index 6e95747412b1d256994634757c6207b2da662933..85b4ec431b00bf541e5346cc4391d72ce153b8ee 100644
--- a/src/test/java/fr/inra/oresing/rest/model/data/DownloadDatasetQueryAdvancedSearchTest.java
+++ b/src/test/java/fr/inra/oresing/rest/model/data/DownloadDatasetQueryAdvancedSearchTest.java
@@ -197,7 +197,7 @@ class DownloadDatasetQueryAdvancedSearchTest {
}
return true;
});
- Assertions.assertTrue(test);
+ assertTrue(test);
} else if (componentFilters.size() != 1) {
fail("componentFilters must not be empty");
}
diff --git a/src/test/resources/fr/inra/oresing/client/OpenAdomClient.groovy b/src/test/resources/fr/inra/oresing/client/OpenAdomClient.groovy
index 5ec77536798c4f517415922e31f9df380f0f41b3..f5a53938f9de19d7a2bc44bc446336c664c31566 100644
--- a/src/test/resources/fr/inra/oresing/client/OpenAdomClient.groovy
+++ b/src/test/resources/fr/inra/oresing/client/OpenAdomClient.groovy
@@ -1,46 +1,46 @@
package fr.inra.oresing.client
-import com.fasterxml.jackson.core.type.TypeReference;
+import com.fasterxml.jackson.core.type.TypeReference
import com.fasterxml.jackson.databind.ObjectMapper
-import org.apache.commons.io.file.AccumulatorPathVisitor;
-import org.apache.commons.io.file.Counters;
-import org.apache.hc.client5.http.classic.methods.HttpPost;
-import org.apache.hc.client5.http.cookie.BasicCookieStore;
-import org.apache.hc.client5.http.entity.mime.FileBody;
+import org.apache.commons.io.file.AccumulatorPathVisitor
+import org.apache.commons.io.file.Counters
+import org.apache.hc.client5.http.classic.methods.HttpPost
+import org.apache.hc.client5.http.cookie.BasicCookieStore
+import org.apache.hc.client5.http.entity.mime.FileBody
import org.apache.hc.client5.http.entity.mime.MultipartEntityBuilder
-import org.apache.hc.client5.http.impl.classic.HttpClients;
-import org.apache.hc.core5.http.ClassicHttpRequest;
-import org.apache.hc.core5.http.ClassicHttpResponse;
-import org.apache.hc.core5.http.HttpEntity;
-import org.apache.hc.core5.http.io.HttpClientResponseHandler;
-import org.apache.hc.core5.http.io.entity.EntityUtils;
+import org.apache.hc.client5.http.impl.classic.HttpClients
+import org.apache.hc.core5.http.ClassicHttpRequest
+import org.apache.hc.core5.http.ClassicHttpResponse
+import org.apache.hc.core5.http.HttpEntity
+import org.apache.hc.core5.http.io.HttpClientResponseHandler
+import org.apache.hc.core5.http.io.entity.EntityUtils
import org.apache.hc.core5.http.io.support.ClassicRequestBuilder
-import java.nio.file.Files;
+import java.nio.file.Files
import java.nio.file.Path
-import java.util.stream.Collectors;
+import java.util.stream.Collectors
@Grab(group = "commons-io", module = "commons-io", version = "2.8.0")
@Grab(group = "org.apache.httpcomponents.client5", module = "httpclient5", version = "5.2.1")
-ClientConfiguration clientConfiguration = readConfiguration();
+ClientConfiguration clientConfiguration = readConfiguration()
-String applicationName = clientConfiguration.applicationName();
-URI instanceUrl = clientConfiguration.instanceUrl();
+String applicationName = clientConfiguration.applicationName()
+URI instanceUrl = clientConfiguration.instanceUrl()
-String login;
-String password;
-boolean interactive = true;
-Scanner scanner = new Scanner(System.in);
+String login
+String password
+boolean interactive = true
+Scanner scanner = new Scanner(System.in)
if (interactive) {
- System.out.println("Veuillez saisir les informations de connexion à " + instanceUrl);
- System.out.print("identifiant : ");
- login = scanner.nextLine();
- System.out.print("mot de passe : ");
- password = scanner.nextLine();
+ System.out.println("Veuillez saisir les informations de connexion à " + instanceUrl)
+ System.out.print("identifiant : ")
+ login = scanner.nextLine()
+ System.out.print("mot de passe : ")
+ password = scanner.nextLine()
} else {
- login = "poussin";
- password = "xxxx";
+ login = "poussin"
+ password = "xxxx"
}
BasicCookieStore cookieStore = new BasicCookieStore()
@@ -120,89 +120,89 @@ HttpClients.custom()
}
ClientConfiguration readConfiguration() throws IOException {
- File configurationFile = new File("openAdom-client-configuration.json");
+ File configurationFile = new File("openAdom-client-configuration.json")
ClientConfiguration clientConfiguration = new ObjectMapper()
.readValue(
configurationFile,
ClientConfiguration.class
- );
- return clientConfiguration;
+ )
+ return clientConfiguration
}
List<Command> newCommands(List<String> data/*, List<String> dataTypes*/) {
List<Command> dataCommands = data.stream()
.flatMap(refType -> getDataCommands(refType).stream())
- .toList();
+ .toList()
- List<Command> commands = new LinkedList<>();
- commands.addAll(dataCommands);
+ List<Command> commands = new LinkedList<>()
+ commands.addAll(dataCommands)
- return commands;
+ return commands
}
List<Command> getUploadDataCommands(String dataType) {
- Path dataDirectoryForDataType = Path.of(dataType);
- List<Command> commands;
+ Path dataDirectoryForDataType = Path.of(dataType)
+ List<Command> commands
if (dataDirectoryForDataType.toFile().exists()) {
if (dataDirectoryForDataType.toFile().isDirectory()) {
- SortedSet<Path> csvFilePaths = findCsvFilePathsInDirectory(dataDirectoryForDataType);
+ SortedSet<Path> csvFilePaths = findCsvFilePathsInDirectory(dataDirectoryForDataType)
commands = csvFilePaths.stream()
.map(Path::toFile)
.map(dataFile -> newUploadDataCommand(dataType, dataFile))
- .toList();
+ .toList()
} else {
- logError("le répertoire " + dataDirectoryForDataType + " est un fichier mais il devrait être un dossier. On l’ignore.");
- commands = Collections.emptyList();
+ logError("le répertoire " + dataDirectoryForDataType + " est un fichier mais il devrait être un dossier. On l’ignore.")
+ commands = Collections.emptyList()
}
} else {
- log("le répertoire " + dataDirectoryForDataType + " n’existe pas. Pas de données à importer pour " + dataType);
- commands = Collections.emptyList();
+ log("le répertoire " + dataDirectoryForDataType + " n’existe pas. Pas de données à importer pour " + dataType)
+ commands = Collections.emptyList()
}
- return commands;
+ return commands
}
List<Command> getDataCommands(String dataName) {
- File dir = new File(dataName);
- File[] csvFiles = dir.listFiles((dir1, name) -> name.endsWith(".csv"));
- List<Command> commands = new LinkedList<>();
+ File dir = new File(dataName)
+ File[] csvFiles = dir.listFiles((dir1, name) -> name.endsWith(".csv"))
+ List<Command> commands = new LinkedList<>()
if (csvFiles == null) {
- return List.of();
+ return List.of()
}
Arrays.stream(csvFiles).forEach(refFile -> {
if (refFile.exists()) {
- Set<Path> csvFilePathsInDirectory;
+ Set<Path> csvFilePathsInDirectory
if (refFile.isFile()) {
- csvFilePathsInDirectory = Collections.singleton(refFile.toPath());
+ csvFilePathsInDirectory = Collections.singleton(refFile.toPath())
} else if (refFile.isDirectory()) {
- csvFilePathsInDirectory = findCsvFilePathsInDirectory(refFile.toPath());
+ csvFilePathsInDirectory = findCsvFilePathsInDirectory(refFile.toPath())
} else {
- throw new IllegalStateException("ne comprend pas de quel type est " + refFile);
+ throw new IllegalStateException("ne comprend pas de quel type est " + refFile)
}
commands.addAll(csvFilePathsInDirectory.stream()
.map(path -> newUploadDataCommand(dataName, path.toFile()))
.toList()
- );
+ )
} else {
- logError("le fichier %s n’existe pas, on ignore l’import du référentiel %s".formatted(refFile, dataName));
- commands.addAll(Collections.emptyList());
+ logError("le fichier %s n’existe pas, on ignore l’import du référentiel %s".formatted(refFile, dataName))
+ commands.addAll(Collections.emptyList())
}
- });
- return commands;
+ })
+ return commands
}
Command newUploadDataCommand(String dataName, File dataFile) {
return new Command() {
@Override
- public String getDescription() {
- return "Téléversement de %s pour alimenter le référentiel %s".formatted(dataFile, dataName);
+ String getDescription() {
+ return "Téléversement de %s pour alimenter le référentiel %s".formatted(dataFile, dataName)
}
@Override
- public ClassicHttpRequest getRequest(UriFactory uriFactory) {
- HttpPost httpPost = new HttpPost(uriFactory.forUploadingData(dataName));
- FileBody refFileBody = new FileBody(dataFile);
+ ClassicHttpRequest getRequest(UriFactory uriFactory) {
+ HttpPost httpPost = new HttpPost(uriFactory.forUploadingData(dataName))
+ FileBody refFileBody = new FileBody(dataFile)
HttpEntity reqEntity = MultipartEntityBuilder.create()
.addPart("file", refFileBody)
.addTextBody("params", """
@@ -211,26 +211,26 @@ Command newUploadDataCommand(String dataName, File dataFile) {
"topublish":true
}
""")
- .build();
- httpPost.setEntity(reqEntity);
- return httpPost;
+ .build()
+ httpPost.setEntity(reqEntity)
+ return httpPost
}
List<Map<String, Object>> parseJsonInResponseBodyForErrorMessagesAndParams(ClassicHttpResponse response) {
try (InputStream inputStream = response.getEntity().getContent()) {
List<Map<String, Object>> responseBody = new ObjectMapper().readValue(inputStream, new TypeReference<List<Map<String, Object>>>() {
- });
+ })
return responseBody.stream()
.map(record -> {
- Map<String, Object> resultMap = new HashMap<>();
- resultMap.put("message", ((Map<String, Object>) record.get("validationCheckResult")).get("message").toString());
- resultMap.put("messageParams", (Map<String, Object>) ((Map<String, Object>) record.get("validationCheckResult")).get("messageParams"));
- return resultMap;
+ Map<String, Object> resultMap = new HashMap<>()
+ resultMap.put("message", ((Map<String, Object>) record.get("validationCheckResult")).get("message").toString())
+ resultMap.put("messageParams", (Map<String, Object>) ((Map<String, Object>) record.get("validationCheckResult")).get("messageParams"))
+ return resultMap
})
- .collect(Collectors.toList());
+ .collect(Collectors.toList())
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
@@ -258,40 +258,40 @@ Command newUploadDataCommand(String dataName, File dataFile) {
}
null
}
- };
+ }
}
SortedSet<Path> findCsvFilePathsInDirectory(Path directory) {
try {
- AccumulatorPathVisitor accumulatorPathVisitor = new AccumulatorPathVisitor(Counters.longPathCounters());
- Files.walkFileTree(directory, accumulatorPathVisitor);
+ AccumulatorPathVisitor accumulatorPathVisitor = new AccumulatorPathVisitor(Counters.longPathCounters())
+ Files.walkFileTree(directory, accumulatorPathVisitor)
SortedSet<Path> csvFilePathsInDirectory = accumulatorPathVisitor.getFileList().stream()
.filter(path -> path.getFileName().toString().endsWith(".csv"))
- .collect(Collectors.toCollection(TreeSet::new));
- return Collections.unmodifiableSortedSet(csvFilePathsInDirectory);
+ .collect(Collectors.toCollection(TreeSet::new))
+ return Collections.unmodifiableSortedSet(csvFilePathsInDirectory)
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
void fail(String message) {
- logError(message);
- System.exit(1);
+ logError(message)
+ System.exit(1)
}
static void logError(String string) {
- System.err.println(string);
+ System.err.println(string)
}
static void log(String message) {
- System.out.println(message);
+ System.out.println(message)
}
<T> T parseJsonInResponseBody(ClassicHttpResponse response, TypeReference<T> valueTypeRef) {
try (InputStream inputStream = response.getEntity().getContent()) {
- return new ObjectMapper().readValue(inputStream, valueTypeRef);
+ return new ObjectMapper().readValue(inputStream, valueTypeRef)
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
@@ -329,19 +329,19 @@ record UriFactory(URI instanceUrl, String applicationName) {
URI newUri(String endpoint) {
try {
- return new URI("%s/api/v1/%s".formatted(instanceUrl, endpoint));
+ return new URI("%s/api/v1/%s".formatted(instanceUrl, endpoint))
} catch (URISyntaxException e) {
- throw new RuntimeException("ne devrait pas arriver", e);
+ throw new RuntimeException("ne devrait pas arriver", e)
}
}
- public URI forLogin() {
- return newUri("login");
+ URI forLogin() {
+ return newUri("login")
}
- public URI forUploadingData(String dataType) {
- String endpoint = "applications/%s/data/%s".formatted(applicationName, dataType);
- return newUri(endpoint);
+ URI forUploadingData(String dataType) {
+ String endpoint = "applications/%s/data/%s".formatted(applicationName, dataType)
+ return newUri(endpoint)
}
/*public URI forApplicationReferenceTypes(String applicationName) {
@@ -349,9 +349,9 @@ record UriFactory(URI instanceUrl, String applicationName) {
return newUri(endpoint);
}*/
- public URI forApplicationDataTypes(String applicationName) {
- String endpoint = "applications/%s/data".formatted(applicationName);
- return newUri(endpoint);
+ URI forApplicationDataTypes(String applicationName) {
+ String endpoint = "applications/%s/data".formatted(applicationName)
+ return newUri(endpoint)
}
}
diff --git a/src/test/resources/monsore-upload-bundle/OpenAdomClient.groovy b/src/test/resources/monsore-upload-bundle/OpenAdomClient.groovy
index 5ec77536798c4f517415922e31f9df380f0f41b3..f5a53938f9de19d7a2bc44bc446336c664c31566 100644
--- a/src/test/resources/monsore-upload-bundle/OpenAdomClient.groovy
+++ b/src/test/resources/monsore-upload-bundle/OpenAdomClient.groovy
@@ -1,46 +1,46 @@
package fr.inra.oresing.client
-import com.fasterxml.jackson.core.type.TypeReference;
+import com.fasterxml.jackson.core.type.TypeReference
import com.fasterxml.jackson.databind.ObjectMapper
-import org.apache.commons.io.file.AccumulatorPathVisitor;
-import org.apache.commons.io.file.Counters;
-import org.apache.hc.client5.http.classic.methods.HttpPost;
-import org.apache.hc.client5.http.cookie.BasicCookieStore;
-import org.apache.hc.client5.http.entity.mime.FileBody;
+import org.apache.commons.io.file.AccumulatorPathVisitor
+import org.apache.commons.io.file.Counters
+import org.apache.hc.client5.http.classic.methods.HttpPost
+import org.apache.hc.client5.http.cookie.BasicCookieStore
+import org.apache.hc.client5.http.entity.mime.FileBody
import org.apache.hc.client5.http.entity.mime.MultipartEntityBuilder
-import org.apache.hc.client5.http.impl.classic.HttpClients;
-import org.apache.hc.core5.http.ClassicHttpRequest;
-import org.apache.hc.core5.http.ClassicHttpResponse;
-import org.apache.hc.core5.http.HttpEntity;
-import org.apache.hc.core5.http.io.HttpClientResponseHandler;
-import org.apache.hc.core5.http.io.entity.EntityUtils;
+import org.apache.hc.client5.http.impl.classic.HttpClients
+import org.apache.hc.core5.http.ClassicHttpRequest
+import org.apache.hc.core5.http.ClassicHttpResponse
+import org.apache.hc.core5.http.HttpEntity
+import org.apache.hc.core5.http.io.HttpClientResponseHandler
+import org.apache.hc.core5.http.io.entity.EntityUtils
import org.apache.hc.core5.http.io.support.ClassicRequestBuilder
-import java.nio.file.Files;
+import java.nio.file.Files
import java.nio.file.Path
-import java.util.stream.Collectors;
+import java.util.stream.Collectors
@Grab(group = "commons-io", module = "commons-io", version = "2.8.0")
@Grab(group = "org.apache.httpcomponents.client5", module = "httpclient5", version = "5.2.1")
-ClientConfiguration clientConfiguration = readConfiguration();
+ClientConfiguration clientConfiguration = readConfiguration()
-String applicationName = clientConfiguration.applicationName();
-URI instanceUrl = clientConfiguration.instanceUrl();
+String applicationName = clientConfiguration.applicationName()
+URI instanceUrl = clientConfiguration.instanceUrl()
-String login;
-String password;
-boolean interactive = true;
-Scanner scanner = new Scanner(System.in);
+String login
+String password
+boolean interactive = true
+Scanner scanner = new Scanner(System.in)
if (interactive) {
- System.out.println("Veuillez saisir les informations de connexion à " + instanceUrl);
- System.out.print("identifiant : ");
- login = scanner.nextLine();
- System.out.print("mot de passe : ");
- password = scanner.nextLine();
+ System.out.println("Veuillez saisir les informations de connexion à " + instanceUrl)
+ System.out.print("identifiant : ")
+ login = scanner.nextLine()
+ System.out.print("mot de passe : ")
+ password = scanner.nextLine()
} else {
- login = "poussin";
- password = "xxxx";
+ login = "poussin"
+ password = "xxxx"
}
BasicCookieStore cookieStore = new BasicCookieStore()
@@ -120,89 +120,89 @@ HttpClients.custom()
}
ClientConfiguration readConfiguration() throws IOException {
- File configurationFile = new File("openAdom-client-configuration.json");
+ File configurationFile = new File("openAdom-client-configuration.json")
ClientConfiguration clientConfiguration = new ObjectMapper()
.readValue(
configurationFile,
ClientConfiguration.class
- );
- return clientConfiguration;
+ )
+ return clientConfiguration
}
List<Command> newCommands(List<String> data/*, List<String> dataTypes*/) {
List<Command> dataCommands = data.stream()
.flatMap(refType -> getDataCommands(refType).stream())
- .toList();
+ .toList()
- List<Command> commands = new LinkedList<>();
- commands.addAll(dataCommands);
+ List<Command> commands = new LinkedList<>()
+ commands.addAll(dataCommands)
- return commands;
+ return commands
}
List<Command> getUploadDataCommands(String dataType) {
- Path dataDirectoryForDataType = Path.of(dataType);
- List<Command> commands;
+ Path dataDirectoryForDataType = Path.of(dataType)
+ List<Command> commands
if (dataDirectoryForDataType.toFile().exists()) {
if (dataDirectoryForDataType.toFile().isDirectory()) {
- SortedSet<Path> csvFilePaths = findCsvFilePathsInDirectory(dataDirectoryForDataType);
+ SortedSet<Path> csvFilePaths = findCsvFilePathsInDirectory(dataDirectoryForDataType)
commands = csvFilePaths.stream()
.map(Path::toFile)
.map(dataFile -> newUploadDataCommand(dataType, dataFile))
- .toList();
+ .toList()
} else {
- logError("le répertoire " + dataDirectoryForDataType + " est un fichier mais il devrait être un dossier. On l’ignore.");
- commands = Collections.emptyList();
+ logError("le répertoire " + dataDirectoryForDataType + " est un fichier mais il devrait être un dossier. On l’ignore.")
+ commands = Collections.emptyList()
}
} else {
- log("le répertoire " + dataDirectoryForDataType + " n’existe pas. Pas de données à importer pour " + dataType);
- commands = Collections.emptyList();
+ log("le répertoire " + dataDirectoryForDataType + " n’existe pas. Pas de données à importer pour " + dataType)
+ commands = Collections.emptyList()
}
- return commands;
+ return commands
}
List<Command> getDataCommands(String dataName) {
- File dir = new File(dataName);
- File[] csvFiles = dir.listFiles((dir1, name) -> name.endsWith(".csv"));
- List<Command> commands = new LinkedList<>();
+ File dir = new File(dataName)
+ File[] csvFiles = dir.listFiles((dir1, name) -> name.endsWith(".csv"))
+ List<Command> commands = new LinkedList<>()
if (csvFiles == null) {
- return List.of();
+ return List.of()
}
Arrays.stream(csvFiles).forEach(refFile -> {
if (refFile.exists()) {
- Set<Path> csvFilePathsInDirectory;
+ Set<Path> csvFilePathsInDirectory
if (refFile.isFile()) {
- csvFilePathsInDirectory = Collections.singleton(refFile.toPath());
+ csvFilePathsInDirectory = Collections.singleton(refFile.toPath())
} else if (refFile.isDirectory()) {
- csvFilePathsInDirectory = findCsvFilePathsInDirectory(refFile.toPath());
+ csvFilePathsInDirectory = findCsvFilePathsInDirectory(refFile.toPath())
} else {
- throw new IllegalStateException("ne comprend pas de quel type est " + refFile);
+ throw new IllegalStateException("ne comprend pas de quel type est " + refFile)
}
commands.addAll(csvFilePathsInDirectory.stream()
.map(path -> newUploadDataCommand(dataName, path.toFile()))
.toList()
- );
+ )
} else {
- logError("le fichier %s n’existe pas, on ignore l’import du référentiel %s".formatted(refFile, dataName));
- commands.addAll(Collections.emptyList());
+ logError("le fichier %s n’existe pas, on ignore l’import du référentiel %s".formatted(refFile, dataName))
+ commands.addAll(Collections.emptyList())
}
- });
- return commands;
+ })
+ return commands
}
Command newUploadDataCommand(String dataName, File dataFile) {
return new Command() {
@Override
- public String getDescription() {
- return "Téléversement de %s pour alimenter le référentiel %s".formatted(dataFile, dataName);
+ String getDescription() {
+ return "Téléversement de %s pour alimenter le référentiel %s".formatted(dataFile, dataName)
}
@Override
- public ClassicHttpRequest getRequest(UriFactory uriFactory) {
- HttpPost httpPost = new HttpPost(uriFactory.forUploadingData(dataName));
- FileBody refFileBody = new FileBody(dataFile);
+ ClassicHttpRequest getRequest(UriFactory uriFactory) {
+ HttpPost httpPost = new HttpPost(uriFactory.forUploadingData(dataName))
+ FileBody refFileBody = new FileBody(dataFile)
HttpEntity reqEntity = MultipartEntityBuilder.create()
.addPart("file", refFileBody)
.addTextBody("params", """
@@ -211,26 +211,26 @@ Command newUploadDataCommand(String dataName, File dataFile) {
"topublish":true
}
""")
- .build();
- httpPost.setEntity(reqEntity);
- return httpPost;
+ .build()
+ httpPost.setEntity(reqEntity)
+ return httpPost
}
List<Map<String, Object>> parseJsonInResponseBodyForErrorMessagesAndParams(ClassicHttpResponse response) {
try (InputStream inputStream = response.getEntity().getContent()) {
List<Map<String, Object>> responseBody = new ObjectMapper().readValue(inputStream, new TypeReference<List<Map<String, Object>>>() {
- });
+ })
return responseBody.stream()
.map(record -> {
- Map<String, Object> resultMap = new HashMap<>();
- resultMap.put("message", ((Map<String, Object>) record.get("validationCheckResult")).get("message").toString());
- resultMap.put("messageParams", (Map<String, Object>) ((Map<String, Object>) record.get("validationCheckResult")).get("messageParams"));
- return resultMap;
+ Map<String, Object> resultMap = new HashMap<>()
+ resultMap.put("message", ((Map<String, Object>) record.get("validationCheckResult")).get("message").toString())
+ resultMap.put("messageParams", (Map<String, Object>) ((Map<String, Object>) record.get("validationCheckResult")).get("messageParams"))
+ return resultMap
})
- .collect(Collectors.toList());
+ .collect(Collectors.toList())
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
@@ -258,40 +258,40 @@ Command newUploadDataCommand(String dataName, File dataFile) {
}
null
}
- };
+ }
}
SortedSet<Path> findCsvFilePathsInDirectory(Path directory) {
try {
- AccumulatorPathVisitor accumulatorPathVisitor = new AccumulatorPathVisitor(Counters.longPathCounters());
- Files.walkFileTree(directory, accumulatorPathVisitor);
+ AccumulatorPathVisitor accumulatorPathVisitor = new AccumulatorPathVisitor(Counters.longPathCounters())
+ Files.walkFileTree(directory, accumulatorPathVisitor)
SortedSet<Path> csvFilePathsInDirectory = accumulatorPathVisitor.getFileList().stream()
.filter(path -> path.getFileName().toString().endsWith(".csv"))
- .collect(Collectors.toCollection(TreeSet::new));
- return Collections.unmodifiableSortedSet(csvFilePathsInDirectory);
+ .collect(Collectors.toCollection(TreeSet::new))
+ return Collections.unmodifiableSortedSet(csvFilePathsInDirectory)
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
void fail(String message) {
- logError(message);
- System.exit(1);
+ logError(message)
+ System.exit(1)
}
static void logError(String string) {
- System.err.println(string);
+ System.err.println(string)
}
static void log(String message) {
- System.out.println(message);
+ System.out.println(message)
}
<T> T parseJsonInResponseBody(ClassicHttpResponse response, TypeReference<T> valueTypeRef) {
try (InputStream inputStream = response.getEntity().getContent()) {
- return new ObjectMapper().readValue(inputStream, valueTypeRef);
+ return new ObjectMapper().readValue(inputStream, valueTypeRef)
} catch (IOException e) {
- throw new RuntimeException(e);
+ throw new RuntimeException(e)
}
}
@@ -329,19 +329,19 @@ record UriFactory(URI instanceUrl, String applicationName) {
URI newUri(String endpoint) {
try {
- return new URI("%s/api/v1/%s".formatted(instanceUrl, endpoint));
+ return new URI("%s/api/v1/%s".formatted(instanceUrl, endpoint))
} catch (URISyntaxException e) {
- throw new RuntimeException("ne devrait pas arriver", e);
+ throw new RuntimeException("ne devrait pas arriver", e)
}
}
- public URI forLogin() {
- return newUri("login");
+ URI forLogin() {
+ return newUri("login")
}
- public URI forUploadingData(String dataType) {
- String endpoint = "applications/%s/data/%s".formatted(applicationName, dataType);
- return newUri(endpoint);
+ URI forUploadingData(String dataType) {
+ String endpoint = "applications/%s/data/%s".formatted(applicationName, dataType)
+ return newUri(endpoint)
}
/*public URI forApplicationReferenceTypes(String applicationName) {
@@ -349,9 +349,9 @@ record UriFactory(URI instanceUrl, String applicationName) {
return newUri(endpoint);
}*/
- public URI forApplicationDataTypes(String applicationName) {
- String endpoint = "applications/%s/data".formatted(applicationName);
- return newUri(endpoint);
+ URI forApplicationDataTypes(String applicationName) {
+ String endpoint = "applications/%s/data".formatted(applicationName)
+ return newUri(endpoint)
}
}
diff --git a/ui/cypress/fixtures/applications/errors/errors.json b/ui/cypress/fixtures/applications/errors/errors.json
index 0b6f8b4cb4b39a6acaf12fe5a7fe62c93310d543..97e31811dfc1c577a3d479d5b641984f0670a5da 100644
--- a/ui/cypress/fixtures/applications/errors/errors.json
+++ b/ui/cypress/fixtures/applications/errors/errors.json
@@ -1 +1 @@
-{"testUnknownReferenceNameForChecker":[{"errortype":"ValidationError","result":{"message":"unknownReferenceName","params":{"allDataNames":["especes","type_de_sites","projet","pem","sites"],"path":"OA_data > sites > OA_basicComponents > tze_type_nom > OA_checker > OA_params > OA_reference > OA_name","referenceName":"tr_type_de_sites"}},"time":"2025-01-24T17:37:28.702163034","type":"REACTIVE_ERROR"}],"testUnexpectedNameTagInComputedComponents":[{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":["test","context"],"path":"OA_data > pem > OA_computedComponents > site_bassin > OA_tags","notExpectedDomainTags":["contextt"]}},"time":"2025-01-24T17:39:05.860372067","type":"REACTIVE_ERROR"}],"testUnknownReferenceNameForDynamicColumns":[{"errortype":"ValidationError","result":{"message":"unknownReferenceName","params":{"allDataNames":["especes","type_de_sites","projet","pem","sites"],"path":"OA_data > sites > OA_dynamicComponents > proprieteDeTaxon > OA_reference","referenceName":"type_de_site"}},"time":"2025-01-24T17:38:08.454892685","type":"REACTIVE_ERROR"}],"testmissingComponentNameForAuthorization":[{"errortype":"ValidationError","result":{"message":"missingRequiredValue","params":{"path":"OA_data > pem > OA_submission > OA_submissionScope > OA_referenceScopes > 0 > OA_component"}},"time":"2025-01-24T17:37:15.32848605","type":"REACTIVE_ERROR"}],"testMissingOrBadTypeVersionApplication":[{"errortype":"ValidationError","result":{"message":"badVersionPattern","params":{"givenVersion":"deux","path":"OA_application"}},"time":"2025-01-24T17:37:17.54751352","type":"REACTIVE_ERROR"}],"testUnexpectedReferencesForComputation":[{"errortype":"ValidationError","result":{"message":"unknownReferenceName","params":{"allDataNames":["especes","type_de_sites","projet","pem","sites"],"path":"OA_data > pem > OA_basicComponents > chemin > OA_defaultValue > OA_references","referenceName":"site"}},"time":"2025-01-24T17:37:05.744998333","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"unknownReferenceName","params":{"allDataNames":["especes","type_de_sites","projet","pem","sites"],"path":"OA_data > pem > OA_constantComponents > tel_experimental_site > OA_defaultValue > OA_references","referenceName":"site"}},"time":"2025-01-24T17:37:05.746032832","type":"REACTIVE_ERROR"}],"testmissingRequiredValueInTimeScopeInSubmission":[{"errortype":"ValidationError","result":{"message":"missingRequiredValue","params":{"path":"OA_data > pem > OA_submission > OA_submissionScope > OA_timeScope > OA_component"}},"time":"2025-01-24T17:38:44.669771013","type":"REACTIVE_ERROR"}],"testMissingNameApplication":[{"errortype":"ValidationError","result":{"message":"missingRequiredValue","params":{"path":"OA_application > OA_name"}},"time":"2025-01-24T17:39:18.790011654","type":"REACTIVE_ERROR"}],"testUnexpectedReferencesForDefaultValue":[{"errortype":"ValidationError","result":{"message":"unknownReferenceName","params":{"allDataNames":["especes","type_de_sites","projet","pem","sites"],"path":"OA_data > pem > OA_basicComponents > chemin > OA_defaultValue > OA_references","referenceName":"site"}},"time":"2025-01-24T17:37:12.991994698","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"unknownReferenceName","params":{"allDataNames":["especes","type_de_sites","projet","pem","sites"],"path":"OA_data > pem > OA_constantComponents > tel_experimental_site > OA_defaultValue > OA_references","referenceName":"site"}},"time":"2025-01-24T17:37:12.992621666","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"invalidComponentReferenceForSubmissionScopeReference","params":{"submissionReference":"projet","componentReference":"proj","path":"OA_data > pem > OA_submission > OA_submissionScope > OA_referenceScopes > 2"}},"time":"2025-01-24T17:39:51.516424094","type":"REACTIVE_ERROR"}],"testUnsuportedI18nKeyLanguageInDataI18ndisplay":[{"errortype":"ValidationError","result":{"message":"unexpectedSections","params":{"expectedSections":["sbp","ksh","nyn","ps","pt","luo","fil","mgh","ccp","luy","mgo","bas","raj","teo","qu","af","brx","ak","am","kde","ar","as","az","rm","rn","ro","ceb","ru","be","bg","rw","kea","bm","bn","bo","sa","twq","br","sc","bs","sd","xog","se","sg","si","seh","sk","sl","sn","so","sq","ca","sr","ses","mzn","ce","su","sv","sw","ta","asa","yav","cs","te","yrl","tg","cv","th","ti","cy","tk","to","dyo","da","tr","tt","de","cgg","ast","nmg","bem","ug","kgp","dz","uk","bez","ur","dje","haw","ee","uz","tzm","el","nnh","en","eo","chr","es","et","eu","vi","khq","shi","hsb","fa","bgc","ff","fi","rwk","yue","fo","fr","fy","jgo","lkt","wo","wae","zgh","ga","pcm","gd","gl","bho","mni","gu","gv","xh","ha","ckb","he","hi","gsw","hr","agq","kkj","hu","yi","hy","yo","ia","id","ig","naq","vai","ii","frr","is","it","kln","zh","ja","zu","doi","jv","guz","tok","mai","smn","ka","sms","mas","ki","kk","kl","km","kn","ko","ks","ku","kw","ky","lb","ebu","lg","nds","jmc","ln","fur","lo","kok","lt","lu","lv","nus","vun","lag","dav","mg","pis","lrc","mi","mk","ml","mn","mr","ms","mt","my","mdf","dsb","nb","nd","ne","mua","nl","nn","no","rof","kab","oc","kam","mer","sah","om","ann","saq","or","os","sat","mfe","dua","pa","ksb","pl","ewo","ksf"],"path":"OA_data > especes > OA_i18nDisplayPattern > OA_title > en > frrr","unexpectedSections":["frrr"]}},"time":"2025-01-24T17:40:01.636497236","type":"REACTIVE_ERROR"}],"testUnsuportedI18nKeyLanguageInDataI18n":[{"errortype":"ValidationError","result":{"message":"unexpectedSections","params":{"expectedSections":["sbp","ksh","nyn","ps","pt","luo","fil","mgh","ccp","luy","mgo","bas","raj","teo","qu","af","brx","ak","am","kde","ar","as","az","rm","rn","ro","ceb","ru","be","bg","rw","kea","bm","bn","bo","sa","twq","br","sc","bs","sd","xog","se","sg","si","seh","sk","sl","sn","so","sq","ca","sr","ses","mzn","ce","su","sv","sw","ta","asa","yav","cs","te","yrl","tg","cv","th","ti","cy","tk","to","dyo","da","tr","tt","de","cgg","ast","nmg","bem","ug","kgp","dz","uk","bez","ur","dje","haw","ee","uz","tzm","el","nnh","en","eo","chr","es","et","eu","vi","khq","shi","hsb","fa","bgc","ff","fi","rwk","yue","fo","fr","fy","jgo","lkt","wo","wae","zgh","ga","pcm","gd","gl","bho","mni","gu","gv","xh","ha","ckb","he","hi","gsw","hr","agq","kkj","hu","yi","hy","yo","ia","id","ig","naq","vai","ii","frr","is","it","kln","zh","ja","zu","doi","jv","guz","tok","mai","smn","ka","sms","mas","ki","kk","kl","km","kn","ko","ks","ku","kw","ky","lb","ebu","lg","nds","jmc","ln","fur","lo","kok","lt","lu","lv","nus","vun","lag","dav","mg","pis","lrc","mi","mk","ml","mn","mr","ms","mt","my","mdf","dsb","nb","nd","ne","mua","nl","nn","no","rof","kab","oc","kam","mer","sah","om","ann","saq","or","os","sat","mfe","dua","pa","ksb","pl","ewo","ksf"],"path":"OA_data > especes > OA_i18n > OA_title > en > frrr","unexpectedSections":["frrr"]}},"time":"2025-01-24T17:38:22.029359804","type":"REACTIVE_ERROR"}],"testUnexpectedSections":[{"errortype":"ValidationError","result":{"message":"unexpectedSections","params":{"expectedSections":["OA_application","OA_version","OA_data","OA_additionalFiles","OA_rightsRequest","OA_tags"],"path":"OA_version > OA_application > OA_data > OA_unexpectedTag > OA_rightsRequest > OA_tags","unexpectedSections":["OA_unexpectedTag"]}},"time":"2025-01-24T17:38:12.859469485","type":"REACTIVE_ERROR"}],"testBadEnumSectionTypeInSubmission":[{"errortype":"ValidationError","result":{"message":"badEnumSectionType","params":{"givenValue":"OA_VERSIONINGY","path":"OA_data > pem > OA_submission > OA_strategy","acceptedValues":["OA_INSERTION","OA_VERSIONING"]}},"time":"2025-01-24T17:37:24.161963506","type":"REACTIVE_ERROR"}],"testUnsuportedI18nKeyLanguageInRightsRequestDescription":[{"errortype":"ValidationError","result":{"message":"unexpectedSections","params":{"expectedSections":["sbp","ksh","nyn","ps","pt","luo","fil","mgh","ccp","luy","mgo","bas","raj","teo","qu","af","brx","ak","am","kde","ar","as","az","rm","rn","ro","ceb","ru","be","bg","rw","kea","bm","bn","bo","sa","twq","br","sc","bs","sd","xog","se","sg","si","seh","sk","sl","sn","so","sq","ca","sr","ses","mzn","ce","su","sv","sw","ta","asa","yav","cs","te","yrl","tg","cv","th","ti","cy","tk","to","dyo","da","tr","tt","de","cgg","ast","nmg","bem","ug","kgp","dz","uk","bez","ur","dje","haw","ee","uz","tzm","el","nnh","en","eo","chr","es","et","eu","vi","khq","shi","hsb","fa","bgc","ff","fi","rwk","yue","fo","fr","fy","jgo","lkt","wo","wae","zgh","ga","pcm","gd","gl","bho","mni","gu","gv","xh","ha","ckb","he","hi","gsw","hr","agq","kkj","hu","yi","hy","yo","ia","id","ig","naq","vai","ii","frr","is","it","kln","zh","ja","zu","doi","jv","guz","tok","mai","smn","ka","sms","mas","ki","kk","kl","km","kn","ko","ks","ku","kw","ky","lb","ebu","lg","nds","jmc","ln","fur","lo","kok","lt","lu","lv","nus","vun","lag","dav","mg","pis","lrc","mi","mk","ml","mn","mr","ms","mt","my","mdf","dsb","nb","nd","ne","mua","nl","nn","no","rof","kab","oc","kam","mer","sah","om","ann","saq","or","os","sat","mfe","dua","pa","ksb","pl","ewo","ksf"],"path":"OA_rightsRequest > OA_i18n > OA_description > en > frrr","unexpectedSections":["frrr"]}},"time":"2025-01-24T17:39:28.781925036","type":"REACTIVE_ERROR"}],"testUnknownNameAuthorizationScopeInFileNameSubmission":[{"errortype":"ValidationError","result":{"message":"unknownNameReferenceScope","params":{"path":"OA_submission > OA_fileName > OA_referenceScopes > site_bassine","unknownAuthorizationScope":"site_bassine","knownAuthorizationScope":["site_bassin","projet"]}},"time":"2025-01-24T17:39:25.081346451","type":"REACTIVE_ERROR"}],"testMissingMandatorySectionsInConstantComponents":[{"errortype":"ValidationError","result":{"message":"missingMandatoriesSections","params":{"missingMandatoriesSections":["OA_rowNumber"],"path":"OA_data > pem > OA_constantComponents > tel_experimental_network > OA_importHeaderTarget > OA_columnNumber"}},"time":"2025-01-24T17:38:17.182456851","type":"REACTIVE_ERROR"}],"testInvalidMinMaxForCheckerDate":[{"errortype":"ValidationError","result":{"message":"invalidMinMaxForCheckerDate","params":{"declaredPattern":"dd/MM/yyyy","path":"OA_data > pem > OA_basicComponents > date > OA_checker > OA_params","declaredMinValue":"12/31/1980","declaredMaxValue":"31/12/2024"}},"time":"2025-01-24T17:37:08.059722906","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"invalidMinMaxForCheckerDate","params":{"declaredPattern":"dd/MM/yyyy","path":"OA_data > pem > OA_basicComponents > date > OA_checker > OA_params","declaredMinValue":"31/12/1980","declaredMaxValue":"12/31/2024"}},"time":"2025-01-24T17:38:31.492135817","type":"REACTIVE_ERROR"}],"testBadNameApplication":[{"errortype":"ValidationError","result":{"message":"unsupportedNameApplication","params":{"path":"OA_application","nameApplication":"F4KE app!cat°"}},"time":"2025-01-24T17:38:06.342625501","type":"REACTIVE_ERROR"}],"testBadVersionApplication":[{"errortype":"ValidationError","result":{"message":"badVersionPattern","params":{"givenVersion":"-2","path":"OA_application"}},"time":"2025-01-24T17:37:49.764952482","type":"REACTIVE_ERROR"}],"testUnknownColumnNumberToFirstRowLineInConstantComponents":[{"errortype":"ValidationError","result":{"message":"negativeConstantImportHeaderColumnNumber","params":{"path":"OA_data > pem > OA_constantComponents > tel_experimental_site > OA_importHeaderTarget > OA_columnNumber"}},"time":"2025-01-24T17:38:33.606118512","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"negativeConstantImportHeaderColumnNumber","params":{"path":"OA_data > pem > OA_constantComponents > tel_experimental_network > OA_importHeaderTarget > OA_columnNumber"}},"time":"2025-01-24T17:40:04.011524172","type":"REACTIVE_ERROR"}],"testBadBuilderVersion":[{"errortype":"ValidationError","result":{"message":"unsupportedOpenadomVersion","params":{"path":"OA_version","actualVersion":"2","expectedVersion":"2.0.1"}},"time":"2025-01-24T17:37:51.948444866","type":"REACTIVE_ERROR"}],"testMissingReferenceNameForChecker":[{"errortype":"ValidationError","result":{"message":"unknownReferenceName","params":{"allDataNames":["especes","type_de_sites","projet","pem","sites"],"path":"OA_data > sites > OA_basicComponents > tze_type_nom > OA_checker > OA_params > OA_reference > OA_name","referenceName":"toto"}},"time":"2025-01-24T17:37:19.835435388","type":"REACTIVE_ERROR"}],"testBadNameTag":[{"errortype":"ValidationError","result":{"message":"badTagsPatterns","params":{"path":"OA_data > 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OA_i18n"}},"time":"2025-01-29T21:15:59.461824445","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"missingMandatoriesSections","params":{"missingMandatoriesSections":["OA_reference","OA_component"],"path":"OA_data > pem > OA_submission > OA_submissionScope > OA_referenceScopes > 0 > OA_exportHeader > OA_i18n"}},"time":"2025-01-29T21:21:22.569273958","type":"REACTIVE_ERROR"}],"testInvalidNaturalKey":[{"errortype":"ValidationError","result":{"message":"invalidNaturalKey","params":{"path":"OA_data > especes","invalidNaturalKeyElements":["espNom"],"expectedComponentLabel":["colonne_homonyme_entre_referentiels","esp_definition_en","my_computed_column","esp_nom","esp_definition_fr"]}},"time":"2025-01-29T21:15:20.493159566","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"invalidNaturalKey","params":{"path":"OA_data > 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proprieteDeTaxon > OA_reference"}},"time":"2025-01-29T21:16:22.059670251","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"missingRequiredValue","params":{"path":"OA_data > sites > OA_dynamicComponents > proprieteDeTaxon > OA_reference"}},"time":"2025-01-29T21:21:52.647592523","type":"REACTIVE_ERROR"}],"testUnexpectedNameTagInBasicComponent":[{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":["test","context"],"path":"OA_data > pem > OA_basicComponents > projet > OA_tags","notExpectedDomainTags":["testz"]}},"time":"2025-01-29T21:15:16.094543679","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":["test","context"],"path":"OA_data > pem > OA_basicComponents > projet > 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OA_components"}},"time":"2025-01-29T21:20:37.749165272","type":"REACTIVE_ERROR"}],"testNotExpectedTagsInConstantComponents":[{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":["test","context"],"path":"OA_data > pem > OA_constantComponents > tel_experimental_network > OA_tags","notExpectedDomainTags":["testz"]}},"time":"2025-01-29T21:15:04.677813518","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":["test","context"],"path":"OA_data > pem > OA_constantComponents > tel_experimental_network > 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OA_components"}},"time":"2025-01-29T21:21:46.766014621","type":"REACTIVE_ERROR"}],"testBadDomaineTagPattern":[{"errortype":"ValidationError","result":{"message":"badDomainTagPattern","params":{"path":"OA_tags","domainTagPattern":"^[a-z][a-z_0-9]*[a-z0-9]$"}},"time":"2025-01-29T21:16:06.133928208","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"illegalDomainTagPattern","params":{"reservedTagNames":["NoTag[tagDefinition=NO_TAG, tagName=no_tag]"],"path":"OA_tags","expectedPattern":"^[a-z][a-z_0-9]*[a-z0-9]$"}},"time":"2025-01-29T21:16:06.134187079","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > especes","notExpectedDomainTags":["context"]}},"time":"2025-01-29T21:16:06.134275214","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > especes > OA_basicComponents > esp_nom > OA_tags","notExpectedDomainTags":["test"]}},"time":"2025-01-29T21:16:06.134672101","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > projet","notExpectedDomainTags":["test","context"]}},"time":"2025-01-29T21:16:06.134991508","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > type_de_sites","notExpectedDomainTags":["context"]}},"time":"2025-01-29T21:16:06.135220176","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > sites","notExpectedDomainTags":["context"]}},"time":"2025-01-29T21:16:06.135485192","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > sites > OA_dynamicComponents > proprieteDeTaxon > OA_tags","notExpectedDomainTags":["test","context"]}},"time":"2025-01-29T21:16:06.13589434","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > pem","notExpectedDomainTags":["test","context"]}},"time":"2025-01-29T21:16:06.13602793","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > pem > OA_basicComponents > projet > OA_tags","notExpectedDomainTags":["test"]}},"time":"2025-01-29T21:16:06.136467746","type":"REACTIVE_ERROR"},{"errortype":"ValidationError","result":{"message":"notExpectedDomainTags","params":{"expectedDomainTags":[],"path":"OA_data > pem > OA_constantComponents > tel_experimental_network > 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\ No newline at end of file
diff --git a/ui/cypress/fixtures/applications/errors/ref_ola_errors.json b/ui/cypress/fixtures/applications/errors/ref_ola_errors.json
index 0e741c56277e8496859a43d374cc32d4521d344b..be24abdd8ef56c24a0b3a32e9581ec14305052dc 100644
--- a/ui/cypress/fixtures/applications/errors/ref_ola_errors.json
+++ b/ui/cypress/fixtures/applications/errors/ref_ola_errors.json
@@ -1 +1 @@
-{"missingMandatoryColumns":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"missingMandatoryColumns\",\"messageParams\":{\"missingMandatoryColumns\":[\"Date\"]},\"target\":null},\"lineNumber\":7}]","unexpectedHeaderColumnsInList":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"missingMandatoryColumns\",\"messageParams\":{\"missingMandatoryColumns\":[\"Date\"]},\"target\":null},\"lineNumber\":7}]"}
\ No newline at end of file
+{"duplicatedHeaders":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"duplicatedHeaders\",\"messageParams\":{\"duplicatedHeaders\":[\"définition_fr\"]},\"target\":null},\"lineNumber\":1}]","patternNotMatchedWithComponent":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidDateWithComponent\",\"messageParams\":{\"target\":{\"column\":\"date\"},\"pattern\":\"dd/MM/yyyy\",\"value\":\"12:00:00\"},\"target\":{\"column\":\"date\"},\"date\":null,\"localDateTime\":null,\"value\":null},\"lineNumber\":2}]","duplicatedLineInReference":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"duplicatedLineInReference\",\"messageParams\":{\"file\":\"proprietes_taxon\",\"lineNumber\":40,\"otherLines\":[39,40],\"duplicateKey\":\"proprietes_taxonKnotes_libres\"},\"target\":null},\"lineNumber\":40}]","invalidDateWithComponent":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidDateWithComponent\",\"messageParams\":{\"target\":{\"column\":\"date\"},\"pattern\":\"dd/MM/yyyy\",\"value\":\"01/01/16\"},\"target\":{\"column\":\"date\"},\"date\":null,\"localDateTime\":null,\"value\":null},\"lineNumber\":2}]","invalidDate":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidDateWithComponent\",\"messageParams\":{\"target\":{\"column\":\"date_day\"},\"pattern\":\"dd/MM/yyyy\",\"value\":\"x24/02/2020\"},\"target\":{\"column\":\"date_day\"},\"date\":null,\"localDateTime\":null,\"value\":null},\"lineNumber\":3}]","invalidFloat":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidFloatWithComponent\",\"messageParams\":{\"target\":{\"column\":\"transparenceParSecchi\"},\"value\":\"x10\"},\"target\":{\"column\":\"transparenceParSecchi\"},\"value\":null},\"lineNumber\":3}]","invalidIntegerWithComponent":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidIntegerWithComponent\",\"messageParams\":{\"target\":{\"column\":\"ordre_affichage\"},\"value\":\"x\"},\"target\":{\"column\":\"ordre_affichage\"},\"value\":null},\"lineNumber\":5}]","invalidReferenceWithComponent":"[{\"validationCheckResult\":{\"target\":{\"column\":\"site\"},\"level\":\"ERROR\",\"rawValue\":\"martin\",\"matchedReferenceHierarchicalKey\":null,\"message\":\"invalidReferenceWithComponent\",\"messageParams\":{\"target\":\"site\",\"referenceValues\":[],\"refType\":\"site\",\"value\":\"martin\"},\"value\":{\"refType\":\"site\",\"referenceValues\":{},\"value\":{\"sql\":\"martin\"},\"sqlType\":\"LTREE\",\"hierarchicalKey\":{\"sql\":\"martin\"}}},\"lineNumber\":39}]","duplicatedLineInDatatype":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"duplicatedLineInReference\",\"messageParams\":{\"file\":\"condition_prelevements\",\"lineNumber\":3,\"otherLines\":[2,3],\"duplicateKey\":\"condition_prelevementsK22_01_2020__08COLON45COLON00__leman\"},\"target\":null},\"lineNumber\":3}]","invalidInt":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidIntegerWithComponent\",\"messageParams\":{\"target\":{\"column\":\"temperatureDeLAir\"},\"value\":\"x8\"},\"target\":{\"column\":\"temperatureDeLAir\"},\"value\":null},\"lineNumber\":3}]","invalidFloatWithColumn":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidFloatWithComponent\",\"messageParams\":{\"target\":{\"column\":\"isFloatValue\"},\"value\":\"x\"},\"target\":{\"column\":\"isFloatValue\"},\"value\":null},\"lineNumber\":5}]","invalidHeaders":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidHeaders\",\"messageParams\":{\"expectedColumns\":[\"Date\",\"site\",\"isFloatValue\",\"nom de la propriété_en\",\"nom de la propriété_fr\",\"type associé\",\"définition_en\",\"définition_fr\",\"isQualitative\",\"nom de la propriété_key\",\"ordre d'affichage\"],\"actualColumns\":[\"Date\",\"nom de la propriété_key\",\"nom de la propriété_fr\",\"nom de la propriété_en\",\"définition_fr\",\"définition_en\",\"définition_es\",\"isFloatValue\",\"isQualitative\",\"type associé\",\"ordre d'affichage\",\"site\"],\"missingComponents\":[],\"unknownComponents\":[\"définition_es\"]},\"target\":null},\"lineNumber\":1}]","emptyHeader":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"emptyHeader\",\"messageParams\":{\"headerLine\":1},\"target\":null},\"lineNumber\":1}]","unexpectedHeaderColumn":"[{\"validationCheckResult\":{\"level\":\"ERROR\",\"message\":\"invalidHeaders\",\"messageParams\":{\"expectedColumns\":[\"Date\",\"site\",\"isFloatValue\",\"nom de la propriété_en\",\"nom de la propriété_fr\",\"type associé\",\"définition_en\",\"définition_fr\",\"isQualitative\",\"nom 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\ No newline at end of file
diff --git a/ui/cypress/fixtures/applications/ore/monsore/changeMonsore.txt b/ui/cypress/fixtures/applications/ore/monsore/changeMonsore.txt
index d461fe9c371982053c563a199737fe532268384c..e0d1a1a3aad2e3b8541de620574c799464f51331 100644
--- a/ui/cypress/fixtures/applications/ore/monsore/changeMonsore.txt
+++ b/ui/cypress/fixtures/applications/ore/monsore/changeMonsore.txt
@@ -1,17 +1,17 @@
-{"result":0.0,"time":[2025,1,27,14,35,21,318697431],"type":"REACTIVE_PROGRESS"}
-{"result":"application.ChangeConfiguration.configuration.rights.checking","params":{"applicationName":"monsore"},"time":[2025,1,27,14,35,21,320733650],"type":"REACTIVE_INFO"}
-{"result":0.02,"time":[2025,1,27,14,35,21,320793310],"type":"REACTIVE_PROGRESS"}
-{"result":"application.ChangeConfiguration.configuration.parsingConfiguration.forSingle","params":{"applicationName":"monsore"},"time":[2025,1,27,14,35,21,320844150],"type":"REACTIVE_INFO"}
-{"result":"application.ChangeConfiguration.configuration.testYamlIsvalid","params":null,"time":[2025,1,27,14,35,21,320870175],"type":"REACTIVE_INFO"}
-{"result":"application.ChangeConfiguration.configuration.yamlIsvalid","params":null,"time":[2025,1,27,14,35,21,322106561],"type":"REACTIVE_INFO"}
-{"result":"application.ChangeConfiguration.configuration.versionIsValid","params":null,"time":[2025,1,27,14,35,21,322143014],"type":"REACTIVE_INFO"}
-{"result":0.03,"time":[2025,1,27,14,35,21,322173348],"type":"REACTIVE_PROGRESS"}
-{"result":"application.ChangeConfiguration.configuration.Starting parsing of configuration","params":{},"time":[2025,1,27,14,35,21,425169416],"type":"REACTIVE_INFO"}
-{"result":0.0,"time":[2025,1,27,14,35,21,425245308],"type":"REACTIVE_PROGRESS"}
-{"result":0.0,"time":[2025,1,27,14,35,21,425264322],"type":"REACTIVE_PROGRESS"}
-{"result":"application.ChangeConfiguration.configuration.CheckSyntax.startValidation.start","params":{"applicationName":"monsore"},"time":[2025,1,27,14,35,21,450253761],"type":"REACTIVE_INFO"}
-{"result":"application.configuration.create.register.start","params":{"applicationName":"monsore"},"time":[2025,1,27,14,35,21,450321163],"type":"REACTIVE_INFO"}
-{"result":"application.ChangeConfiguration.configuration.parsingConfiguration.endparsing","params":{"applicationName":"monsore"},"time":[2025,1,27,14,35,21,450347926],"type":"REACTIVE_INFO"}
-{"result":"application.register","params":{"applicationName":"monsore"},"time":[2025,1,27,14,35,21,489379780],"type":"REACTIVE_INFO"}
-{"result":"acb7a301-204b-41d8-9698-f778a4d78c70","time":[2025,1,27,14,35,21,503369889],"type":"REACTIVE_RESULT"}
-{"result":1.0,"time":[2025,1,27,14,35,21,503464537],"type":"REACTIVE_PROGRESS"}
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diff --git a/ui/cypress/fixtures/applications/ore/monsore/createMonsore.txt b/ui/cypress/fixtures/applications/ore/monsore/createMonsore.txt
index d12084430970cf725ff7150bc656f70c65ce024b..51ef5c623878475ae4ab55ca0dc2265f8aa72621 100644
--- a/ui/cypress/fixtures/applications/ore/monsore/createMonsore.txt
+++ b/ui/cypress/fixtures/applications/ore/monsore/createMonsore.txt
@@ -1,21 +1,21 @@
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diff --git a/ui/cypress/fixtures/applications/ore/monsore/validateMonsore.txt b/ui/cypress/fixtures/applications/ore/monsore/validateMonsore.txt
index 2bee573057e97552278531cecb8fb674ad059915..7577010c934562015a04d386b70a1cc208768320 100644
--- a/ui/cypress/fixtures/applications/ore/monsore/validateMonsore.txt
+++ b/ui/cypress/fixtures/applications/ore/monsore/validateMonsore.txt
@@ -1,10 +1,10 @@
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